Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRICKLE3O43900 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
PRICKLE3O43900 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PRICKLE3O43900 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.47■□□□□ 0.39
PRICKLE3O43900 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRICKLE3O43900 AL121672.3-201ENST00000608644 468 ntBASIC17.47■□□□□ 0.39
PRICKLE3O43900 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.47■□□□□ 0.39
PRICKLE3O43900 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.47■□□□□ 0.39
PRICKLE3O43900 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRICKLE3O43900 AIRN-201ENST00000601203 4374 ntBASIC17.47■□□□□ 0.39
PRICKLE3O43900 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRICKLE3O43900 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRICKLE3O43900 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.47■□□□□ 0.39
PRICKLE3O43900 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
PRICKLE3O43900 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PRICKLE3O43900 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRICKLE3O43900 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRICKLE3O43900 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.47■□□□□ 0.39
PRICKLE3O43900 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRICKLE3O43900 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.47■□□□□ 0.39
PRICKLE3O43900 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRICKLE3O43900 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRICKLE3O43900 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PRICKLE3O43900 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRICKLE3O43900 LINC00602-201ENST00000629776 2065 ntBASIC17.46■□□□□ 0.39
PRICKLE3O43900 AL096828.2-201ENST00000567259 1965 ntBASIC17.46■□□□□ 0.39
PRICKLE3O43900 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
PRICKLE3O43900 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRICKLE3O43900 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.46■□□□□ 0.39
PRICKLE3O43900 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRICKLE3O43900 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PRICKLE3O43900 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRICKLE3O43900 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.46■□□□□ 0.39
PRICKLE3O43900 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRICKLE3O43900 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.46■□□□□ 0.39
PRICKLE3O43900 BX276092.5-203ENST00000456199 560 ntBASIC17.46■□□□□ 0.39
PRICKLE3O43900 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.46■□□□□ 0.39
PRICKLE3O43900 RN7SL606P-201ENST00000472779 293 ntBASIC17.46■□□□□ 0.39
PRICKLE3O43900 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.46■□□□□ 0.39
PRICKLE3O43900 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.46■□□□□ 0.39
PRICKLE3O43900 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
PRICKLE3O43900 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRICKLE3O43900 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.46■□□□□ 0.39
PRICKLE3O43900 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.46■□□□□ 0.39
PRICKLE3O43900 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.46■□□□□ 0.39
PRICKLE3O43900 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.46■□□□□ 0.39
PRICKLE3O43900 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRICKLE3O43900 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.46■□□□□ 0.39
PRICKLE3O43900 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.46■□□□□ 0.39
PRICKLE3O43900 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRICKLE3O43900 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRICKLE3O43900 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRICKLE3O43900 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PRICKLE3O43900 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
PRICKLE3O43900 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.46■□□□□ 0.38
PRICKLE3O43900 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRICKLE3O43900 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRICKLE3O43900 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.45■□□□□ 0.38
PRICKLE3O43900 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PRICKLE3O43900 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRICKLE3O43900 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRICKLE3O43900 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRICKLE3O43900 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
PRICKLE3O43900 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRICKLE3O43900 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRICKLE3O43900 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.45■□□□□ 0.38
PRICKLE3O43900 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRICKLE3O43900 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRICKLE3O43900 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRICKLE3O43900 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.45■□□□□ 0.38
PRICKLE3O43900 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRICKLE3O43900 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRICKLE3O43900 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRICKLE3O43900 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRICKLE3O43900 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRICKLE3O43900 AP002383.4-201ENST00000442518 975 ntBASIC17.45■□□□□ 0.38
PRICKLE3O43900 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.45■□□□□ 0.38
PRICKLE3O43900 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.45■□□□□ 0.38
PRICKLE3O43900 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.45■□□□□ 0.38
PRICKLE3O43900 NPAP1P7-201ENST00000613027 823 ntBASIC17.45■□□□□ 0.38
PRICKLE3O43900 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.45■□□□□ 0.38
PRICKLE3O43900 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.45■□□□□ 0.38
PRICKLE3O43900 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRICKLE3O43900 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRICKLE3O43900 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRICKLE3O43900 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRICKLE3O43900 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRICKLE3O43900 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.45■□□□□ 0.38
PRICKLE3O43900 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PRICKLE3O43900 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
PRICKLE3O43900 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRICKLE3O43900 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.44■□□□□ 0.38
PRICKLE3O43900 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRICKLE3O43900 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRICKLE3O43900 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRICKLE3O43900 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRICKLE3O43900 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRICKLE3O43900 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.44■□□□□ 0.38
PRICKLE3O43900 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRICKLE3O43900 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms