Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LDB2O43679 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LDB2O43679 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LDB2O43679 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LDB2O43679 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
LDB2O43679 HLA-F-220ENST00000434407 884 ntBASIC18.22■□□□□ 0.51
LDB2O43679 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.22■□□□□ 0.51
LDB2O43679 AL136038.4-201ENST00000603606 1261 ntBASIC18.22■□□□□ 0.51
LDB2O43679 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LDB2O43679 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LDB2O43679 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LDB2O43679 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LDB2O43679 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LDB2O43679 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LDB2O43679 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LDB2O43679 AC008764.6-201ENST00000595909 2069 ntBASIC18.22■□□□□ 0.51
LDB2O43679 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LDB2O43679 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LDB2O43679 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LDB2O43679 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LDB2O43679 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LDB2O43679 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.22■□□□□ 0.51
LDB2O43679 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LDB2O43679 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LDB2O43679 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LDB2O43679 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LDB2O43679 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LDB2O43679 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.21■□□□□ 0.51
LDB2O43679 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LDB2O43679 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LDB2O43679 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LDB2O43679 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.21■□□□□ 0.51
LDB2O43679 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LDB2O43679 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.21■□□□□ 0.51
LDB2O43679 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LDB2O43679 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.21■□□□□ 0.51
LDB2O43679 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LDB2O43679 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.21■□□□□ 0.51
LDB2O43679 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.21■□□□□ 0.51
LDB2O43679 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.21■□□□□ 0.51
LDB2O43679 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
LDB2O43679 AC092597.1-201ENST00000487352 616 ntBASIC18.21■□□□□ 0.51
LDB2O43679 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LDB2O43679 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.21■□□□□ 0.51
LDB2O43679 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.21■□□□□ 0.51
LDB2O43679 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.21■□□□□ 0.51
LDB2O43679 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.21■□□□□ 0.51
LDB2O43679 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.21■□□□□ 0.51
LDB2O43679 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LDB2O43679 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LDB2O43679 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LDB2O43679 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LDB2O43679 AC132938.6-201ENST00000623828 1655 ntBASIC18.21■□□□□ 0.51
LDB2O43679 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
LDB2O43679 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LDB2O43679 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.21■□□□□ 0.51
LDB2O43679 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
LDB2O43679 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LDB2O43679 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
LDB2O43679 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LDB2O43679 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
LDB2O43679 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
LDB2O43679 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
LDB2O43679 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
LDB2O43679 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
LDB2O43679 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
LDB2O43679 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LDB2O43679 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LDB2O43679 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LDB2O43679 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
LDB2O43679 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LDB2O43679 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LDB2O43679 AC068880.1-201ENST00000507289 2297 ntBASIC18.2■□□□□ 0.5
LDB2O43679 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.2■□□□□ 0.5
LDB2O43679 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
LDB2O43679 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LDB2O43679 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LDB2O43679 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LDB2O43679 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LDB2O43679 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.2■□□□□ 0.5
LDB2O43679 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LDB2O43679 HOMER2P1-201ENST00000455653 964 ntBASIC18.2■□□□□ 0.5
LDB2O43679 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LDB2O43679 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LDB2O43679 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.2■□□□□ 0.5
LDB2O43679 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LDB2O43679 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LDB2O43679 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LDB2O43679 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.2■□□□□ 0.5
LDB2O43679 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LDB2O43679 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.2■□□□□ 0.5
LDB2O43679 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LDB2O43679 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.2■□□□□ 0.5
LDB2O43679 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LDB2O43679 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.2■□□□□ 0.5
LDB2O43679 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LDB2O43679 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LDB2O43679 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
LDB2O43679 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LDB2O43679 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms