Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SNAI2O43623 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNAI2O43623 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC13.66□□□□□ -0.22
SNAI2O43623 SOX15-203ENST00000570788 1093 ntBASIC13.66□□□□□ -0.22
SNAI2O43623 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SNAI2O43623 MIR4758-201ENST00000577688 71 ntBASIC13.66□□□□□ -0.22
SNAI2O43623 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SNAI2O43623 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC13.66□□□□□ -0.22
SNAI2O43623 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SNAI2O43623 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC13.66□□□□□ -0.22
SNAI2O43623 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNAI2O43623 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.66□□□□□ -0.22
SNAI2O43623 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNAI2O43623 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNAI2O43623 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNAI2O43623 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SNAI2O43623 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNAI2O43623 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNAI2O43623 AC138028.4-201ENST00000564984 1845 ntBASIC13.66□□□□□ -0.22
SNAI2O43623 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SNAI2O43623 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
SNAI2O43623 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SNAI2O43623 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.66□□□□□ -0.22
SNAI2O43623 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC13.66□□□□□ -0.22
SNAI2O43623 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SNAI2O43623 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNAI2O43623 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC13.66□□□□□ -0.22
SNAI2O43623 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNAI2O43623 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNAI2O43623 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC13.65□□□□□ -0.22
SNAI2O43623 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SNAI2O43623 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNAI2O43623 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC13.65□□□□□ -0.22
SNAI2O43623 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNAI2O43623 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNAI2O43623 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNAI2O43623 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC13.65□□□□□ -0.22
SNAI2O43623 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC13.65□□□□□ -0.22
SNAI2O43623 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13.65□□□□□ -0.22
SNAI2O43623 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC13.65□□□□□ -0.22
SNAI2O43623 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SNAI2O43623 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC13.65□□□□□ -0.22
SNAI2O43623 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.65□□□□□ -0.22
SNAI2O43623 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNAI2O43623 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNAI2O43623 SLC29A4P1-201ENST00000398760 971 ntBASIC13.65□□□□□ -0.22
SNAI2O43623 POU5F1P3-201ENST00000428824 1078 ntBASIC13.65□□□□□ -0.22
SNAI2O43623 CROCCP5-201ENST00000436658 830 ntBASIC13.65□□□□□ -0.22
SNAI2O43623 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SNAI2O43623 PRKY-204ENST00000533551 1019 ntBASIC13.65□□□□□ -0.22
SNAI2O43623 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SNAI2O43623 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC13.65□□□□□ -0.22
SNAI2O43623 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC13.65□□□□□ -0.22
SNAI2O43623 MIR5787-201ENST00000611784 55 ntBASIC13.65□□□□□ -0.22
SNAI2O43623 AC092437.1-201ENST00000624794 1048 ntBASIC13.65□□□□□ -0.22
SNAI2O43623 AC134043.2-201ENST00000624206 2238 ntBASIC13.65□□□□□ -0.22
SNAI2O43623 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
SNAI2O43623 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNAI2O43623 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNAI2O43623 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC13.65□□□□□ -0.22
SNAI2O43623 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNAI2O43623 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNAI2O43623 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SNAI2O43623 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNAI2O43623 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SNAI2O43623 FLYWCH1P1-201ENST00000460917 1874 ntBASIC13.65□□□□□ -0.22
SNAI2O43623 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNAI2O43623 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SNAI2O43623 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNAI2O43623 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNAI2O43623 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNAI2O43623 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SNAI2O43623 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
SNAI2O43623 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNAI2O43623 KRT8P3-201ENST00000519669 1449 ntBASIC13.64□□□□□ -0.23
SNAI2O43623 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
SNAI2O43623 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNAI2O43623 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SNAI2O43623 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNAI2O43623 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SNAI2O43623 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNAI2O43623 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNAI2O43623 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNAI2O43623 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNAI2O43623 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNAI2O43623 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SNAI2O43623 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC13.64□□□□□ -0.23
SNAI2O43623 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNAI2O43623 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SNAI2O43623 SIRPAP1-201ENST00000448467 1770 ntBASIC13.64□□□□□ -0.23
SNAI2O43623 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.64□□□□□ -0.23
SNAI2O43623 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC13.64□□□□□ -0.23
SNAI2O43623 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNAI2O43623 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNAI2O43623 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC13.64□□□□□ -0.23
SNAI2O43623 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC13.64□□□□□ -0.23
SNAI2O43623 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC13.64□□□□□ -0.23
SNAI2O43623 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC13.64□□□□□ -0.23
SNAI2O43623 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SNAI2O43623 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms