Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HOXA2O43364 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
HOXA2O43364 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HOXA2O43364 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.45■□□□□ 0.7
HOXA2O43364 AL499627.1-201ENST00000569373 2188 ntBASIC19.45■□□□□ 0.7
HOXA2O43364 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA2O43364 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.45■□□□□ 0.7
HOXA2O43364 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HOXA2O43364 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.45■□□□□ 0.7
HOXA2O43364 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA2O43364 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HOXA2O43364 AC112698.1-201ENST00000510299 916 ntBASIC19.45■□□□□ 0.7
HOXA2O43364 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.45■□□□□ 0.7
HOXA2O43364 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.45■□□□□ 0.7
HOXA2O43364 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.45■□□□□ 0.7
HOXA2O43364 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA2O43364 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA2O43364 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA2O43364 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.45■□□□□ 0.7
HOXA2O43364 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.45■□□□□ 0.7
HOXA2O43364 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA2O43364 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA2O43364 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA2O43364 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXA2O43364 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.44■□□□□ 0.7
HOXA2O43364 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA2O43364 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA2O43364 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXA2O43364 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.44■□□□□ 0.7
HOXA2O43364 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.44■□□□□ 0.7
HOXA2O43364 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA2O43364 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXA2O43364 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.44■□□□□ 0.7
HOXA2O43364 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXA2O43364 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXA2O43364 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.44■□□□□ 0.7
HOXA2O43364 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
HOXA2O43364 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.44■□□□□ 0.7
HOXA2O43364 FAM215A-202ENST00000632077 792 ntBASIC19.44■□□□□ 0.7
HOXA2O43364 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA2O43364 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.44■□□□□ 0.7
HOXA2O43364 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HOXA2O43364 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXA2O43364 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA2O43364 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA2O43364 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA2O43364 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.43■□□□□ 0.7
HOXA2O43364 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
HOXA2O43364 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA2O43364 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA2O43364 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA2O43364 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
HOXA2O43364 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA2O43364 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.43■□□□□ 0.7
HOXA2O43364 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.43■□□□□ 0.7
HOXA2O43364 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.43■□□□□ 0.7
HOXA2O43364 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA2O43364 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.43■□□□□ 0.7
HOXA2O43364 SLC25A1P1-201ENST00000528351 927 ntBASIC19.43■□□□□ 0.7
HOXA2O43364 AC106730.1-201ENST00000566722 1090 ntBASIC19.43■□□□□ 0.7
HOXA2O43364 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXA2O43364 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.43■□□□□ 0.7
HOXA2O43364 MIR7706-201ENST00000613747 67 ntBASIC19.43■□□□□ 0.7
HOXA2O43364 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.43■□□□□ 0.7
HOXA2O43364 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA2O43364 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
HOXA2O43364 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA2O43364 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA2O43364 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.43■□□□□ 0.7
HOXA2O43364 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA2O43364 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA2O43364 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA2O43364 AC243591.1-201ENST00000452967 1364 ntBASIC19.43■□□□□ 0.7
HOXA2O43364 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA2O43364 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
HOXA2O43364 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXA2O43364 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA2O43364 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
HOXA2O43364 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA2O43364 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA2O43364 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXA2O43364 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA2O43364 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA2O43364 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
HOXA2O43364 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA2O43364 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.42■□□□□ 0.7
HOXA2O43364 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXA2O43364 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA2O43364 GMCL1P1-201ENST00000463439 1581 ntBASIC19.42■□□□□ 0.7
HOXA2O43364 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA2O43364 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXA2O43364 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA2O43364 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.42■□□□□ 0.7
HOXA2O43364 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HOXA2O43364 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.42■□□□□ 0.7
HOXA2O43364 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HOXA2O43364 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA2O43364 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA2O43364 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
HOXA2O43364 ZNF259P1-201ENST00000407656 1365 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms