Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 HCG4P8-203ENST00000443049 980 ntBASIC18.9■□□□□ 0.62
MSI1O43347 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.9■□□□□ 0.62
MSI1O43347 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.9■□□□□ 0.62
MSI1O43347 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
MSI1O43347 AP002414.4-201ENST00000589764 1148 ntBASIC18.9■□□□□ 0.62
MSI1O43347 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.9■□□□□ 0.62
MSI1O43347 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSI1O43347 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
MSI1O43347 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.9■□□□□ 0.62
MSI1O43347 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
MSI1O43347 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
MSI1O43347 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSI1O43347 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSI1O43347 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.9■□□□□ 0.62
MSI1O43347 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSI1O43347 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
MSI1O43347 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MSI1O43347 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
MSI1O43347 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
MSI1O43347 PHGDH-209ENST00000641074 1780 ntBASIC18.89■□□□□ 0.61
MSI1O43347 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
MSI1O43347 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
MSI1O43347 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MSI1O43347 ATP5G2P1-201ENST00000433580 426 ntBASIC18.89■□□□□ 0.61
MSI1O43347 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.89■□□□□ 0.61
MSI1O43347 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.89■□□□□ 0.61
MSI1O43347 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.89■□□□□ 0.61
MSI1O43347 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.89■□□□□ 0.61
MSI1O43347 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
MSI1O43347 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MSI1O43347 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
MSI1O43347 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.89■□□□□ 0.61
MSI1O43347 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MSI1O43347 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MSI1O43347 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
MSI1O43347 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MSI1O43347 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
MSI1O43347 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.89■□□□□ 0.61
MSI1O43347 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MSI1O43347 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
MSI1O43347 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.89■□□□□ 0.61
MSI1O43347 AC135776.1-201ENST00000319817 2481 ntBASIC18.89■□□□□ 0.61
MSI1O43347 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
MSI1O43347 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
MSI1O43347 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MSI1O43347 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
MSI1O43347 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MSI1O43347 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
MSI1O43347 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
MSI1O43347 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MSI1O43347 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MSI1O43347 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
MSI1O43347 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MSI1O43347 AC113404.2-201ENST00000507884 177 ntBASIC18.88■□□□□ 0.61
MSI1O43347 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.88■□□□□ 0.61
MSI1O43347 MIR3180-1-201ENST00000580374 94 ntBASIC18.88■□□□□ 0.61
MSI1O43347 MIR3180-3-201ENST00000584616 94 ntBASIC18.88■□□□□ 0.61
MSI1O43347 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
MSI1O43347 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.88■□□□□ 0.61
MSI1O43347 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MSI1O43347 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MSI1O43347 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MSI1O43347 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MSI1O43347 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MSI1O43347 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.88■□□□□ 0.61
MSI1O43347 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MSI1O43347 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
MSI1O43347 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.88■□□□□ 0.61
MSI1O43347 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.88■□□□□ 0.61
MSI1O43347 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MSI1O43347 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MSI1O43347 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
MSI1O43347 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MSI1O43347 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MSI1O43347 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MSI1O43347 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
MSI1O43347 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MSI1O43347 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MSI1O43347 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MSI1O43347 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MSI1O43347 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
MSI1O43347 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
MSI1O43347 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MSI1O43347 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
MSI1O43347 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MSI1O43347 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
MSI1O43347 KRT18P1-202ENST00000452408 1331 ntBASIC18.87■□□□□ 0.61
MSI1O43347 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MSI1O43347 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.87■□□□□ 0.61
MSI1O43347 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.87■□□□□ 0.61
MSI1O43347 LINC00167-201ENST00000530583 1419 ntBASIC18.87■□□□□ 0.61
MSI1O43347 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.87■□□□□ 0.61
MSI1O43347 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
MSI1O43347 AC008687.5-201ENST00000593746 558 ntBASIC18.87■□□□□ 0.61
MSI1O43347 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.87■□□□□ 0.61
MSI1O43347 LETM1P2-201ENST00000597330 2178 ntBASIC18.87■□□□□ 0.61
MSI1O43347 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MSI1O43347 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MSI1O43347 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.87■□□□□ 0.61
MSI1O43347 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms