Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RRP8O43159 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RRP8O43159 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RRP8O43159 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.09■□□□□ 0.33
RRP8O43159 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.09■□□□□ 0.33
RRP8O43159 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
RRP8O43159 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RRP8O43159 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RRP8O43159 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RRP8O43159 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.09■□□□□ 0.33
RRP8O43159 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.09■□□□□ 0.33
RRP8O43159 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RRP8O43159 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RRP8O43159 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RRP8O43159 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RRP8O43159 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RRP8O43159 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RRP8O43159 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
RRP8O43159 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RRP8O43159 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
RRP8O43159 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RRP8O43159 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.08■□□□□ 0.33
RRP8O43159 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.08■□□□□ 0.33
RRP8O43159 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
RRP8O43159 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RRP8O43159 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
RRP8O43159 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RRP8O43159 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.08■□□□□ 0.32
RRP8O43159 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RRP8O43159 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.08■□□□□ 0.32
RRP8O43159 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RRP8O43159 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.08■□□□□ 0.32
RRP8O43159 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RRP8O43159 AC244107.1-201ENST00000442033 332 ntBASIC17.08■□□□□ 0.32
RRP8O43159 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
RRP8O43159 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RRP8O43159 SART3-203ENST00000546611 1184 ntBASIC17.08■□□□□ 0.32
RRP8O43159 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.08■□□□□ 0.32
RRP8O43159 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.08■□□□□ 0.32
RRP8O43159 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.08■□□□□ 0.32
RRP8O43159 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RRP8O43159 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.08■□□□□ 0.32
RRP8O43159 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.08■□□□□ 0.32
RRP8O43159 AC008735.5-201ENST00000623544 497 ntBASIC17.08■□□□□ 0.32
RRP8O43159 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RRP8O43159 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RRP8O43159 HCG11-201ENST00000411553 5696 ntBASIC17.08■□□□□ 0.32
RRP8O43159 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RRP8O43159 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.08■□□□□ 0.32
RRP8O43159 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
RRP8O43159 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RRP8O43159 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RRP8O43159 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.07■□□□□ 0.32
RRP8O43159 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RRP8O43159 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.07■□□□□ 0.32
RRP8O43159 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.07■□□□□ 0.32
RRP8O43159 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RRP8O43159 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RRP8O43159 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RRP8O43159 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.07■□□□□ 0.32
RRP8O43159 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.07■□□□□ 0.32
RRP8O43159 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RRP8O43159 ABCD1P5-201ENST00000445663 754 ntBASIC17.07■□□□□ 0.32
RRP8O43159 AP006288.1-201ENST00000446065 395 ntBASIC17.07■□□□□ 0.32
RRP8O43159 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RRP8O43159 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.07■□□□□ 0.32
RRP8O43159 AC105339.3-201ENST00000560043 636 ntBASIC17.07■□□□□ 0.32
RRP8O43159 AL596442.2-201ENST00000610240 980 ntBASIC17.07■□□□□ 0.32
RRP8O43159 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.07■□□□□ 0.32
RRP8O43159 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RRP8O43159 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RRP8O43159 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.07■□□□□ 0.32
RRP8O43159 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RRP8O43159 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RRP8O43159 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RRP8O43159 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RRP8O43159 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.07■□□□□ 0.32
RRP8O43159 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.07■□□□□ 0.32
RRP8O43159 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RRP8O43159 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.07■□□□□ 0.32
RRP8O43159 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RRP8O43159 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RRP8O43159 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RRP8O43159 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RRP8O43159 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RRP8O43159 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RRP8O43159 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.06■□□□□ 0.32
RRP8O43159 INTS4P1-201ENST00000438455 1935 ntBASIC17.06■□□□□ 0.32
RRP8O43159 AC018445.3-201ENST00000624177 1945 ntBASIC17.06■□□□□ 0.32
RRP8O43159 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RRP8O43159 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RRP8O43159 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RRP8O43159 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.06■□□□□ 0.32
RRP8O43159 AC007967.2-201ENST00000432613 625 ntBASIC17.06■□□□□ 0.32
RRP8O43159 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.06■□□□□ 0.32
RRP8O43159 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.06■□□□□ 0.32
RRP8O43159 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RRP8O43159 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RRP8O43159 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.06■□□□□ 0.32
RRP8O43159 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms