Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC23.98■■□□□ 1.43
APAF1O14727 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
APAF1O14727 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
APAF1O14727 KRT18P48-201ENST00000434763 852 ntBASIC23.98■■□□□ 1.43
APAF1O14727 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
APAF1O14727 FAM86EP-206ENST00000510506 987 ntBASIC23.98■■□□□ 1.43
APAF1O14727 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC23.98■■□□□ 1.43
APAF1O14727 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC23.98■■□□□ 1.43
APAF1O14727 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC23.98■■□□□ 1.43
APAF1O14727 KRT89P-201ENST00000620027 1478 ntBASIC23.98■■□□□ 1.43
APAF1O14727 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
APAF1O14727 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC23.98■■□□□ 1.43
APAF1O14727 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
APAF1O14727 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC23.98■■□□□ 1.43
APAF1O14727 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC23.97■■□□□ 1.43
APAF1O14727 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
APAF1O14727 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
APAF1O14727 BET1L-202ENST00000332865 533 ntTSL 5 BASIC23.97■■□□□ 1.43
APAF1O14727 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
APAF1O14727 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
APAF1O14727 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
APAF1O14727 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
APAF1O14727 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
APAF1O14727 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC23.97■■□□□ 1.43
APAF1O14727 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
APAF1O14727 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
APAF1O14727 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
APAF1O14727 AL136038.3-201ENST00000561909 1096 ntBASIC23.97■■□□□ 1.43
APAF1O14727 NDUFV2-AS1-203ENST00000608008 779 ntBASIC23.97■■□□□ 1.43
APAF1O14727 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC23.97■■□□□ 1.43
APAF1O14727 AP000997.3-201ENST00000623333 2250 ntBASIC23.97■■□□□ 1.43
APAF1O14727 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC23.97■■□□□ 1.43
APAF1O14727 NOC2LP1-202ENST00000452600 2235 ntBASIC23.96■■□□□ 1.43
APAF1O14727 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
APAF1O14727 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
APAF1O14727 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC23.96■■□□□ 1.43
APAF1O14727 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC23.96■■□□□ 1.43
APAF1O14727 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
APAF1O14727 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
APAF1O14727 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
APAF1O14727 AC113404.2-201ENST00000507884 177 ntBASIC23.96■■□□□ 1.43
APAF1O14727 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC23.96■■□□□ 1.43
APAF1O14727 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC23.96■■□□□ 1.43
APAF1O14727 AC087388.1-201ENST00000571370 1112 ntBASIC23.96■■□□□ 1.43
APAF1O14727 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC23.96■■□□□ 1.43
APAF1O14727 AC004263.2-201ENST00000617183 678 ntBASIC23.96■■□□□ 1.43
APAF1O14727 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
APAF1O14727 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
APAF1O14727 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC23.96■■□□□ 1.43
APAF1O14727 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
APAF1O14727 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC23.96■■□□□ 1.43
APAF1O14727 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
APAF1O14727 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
APAF1O14727 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC23.96■■□□□ 1.43
APAF1O14727 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC23.96■■□□□ 1.43
APAF1O14727 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC23.96■■□□□ 1.43
APAF1O14727 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
APAF1O14727 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC23.96■■□□□ 1.43
APAF1O14727 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
APAF1O14727 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC23.95■■□□□ 1.42
APAF1O14727 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
APAF1O14727 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
APAF1O14727 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC23.95■■□□□ 1.42
APAF1O14727 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC23.95■■□□□ 1.42
APAF1O14727 AC005332.1-201ENST00000577698 1310 ntBASIC23.95■■□□□ 1.42
APAF1O14727 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC23.95■■□□□ 1.42
APAF1O14727 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC23.95■■□□□ 1.42
APAF1O14727 IGHGP-201ENST00000390555 1178 ntBASIC23.95■■□□□ 1.42
APAF1O14727 KIRREL3-AS3-201ENST00000404882 831 ntBASIC23.95■■□□□ 1.42
APAF1O14727 DAP-202ENST00000432074 1048 ntTSL 2 BASIC23.95■■□□□ 1.42
APAF1O14727 AP003733.1-201ENST00000491725 852 ntBASIC23.95■■□□□ 1.42
APAF1O14727 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC23.95■■□□□ 1.42
APAF1O14727 PTK2-216ENST00000519881 863 ntTSL 3 BASIC23.95■■□□□ 1.42
APAF1O14727 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.42
APAF1O14727 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC23.95■■□□□ 1.42
APAF1O14727 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC23.95■■□□□ 1.42
APAF1O14727 AL121956.5-201ENST00000625261 221 ntBASIC23.95■■□□□ 1.42
APAF1O14727 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
APAF1O14727 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
APAF1O14727 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC23.95■■□□□ 1.42
APAF1O14727 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
APAF1O14727 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
APAF1O14727 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC23.95■■□□□ 1.42
APAF1O14727 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
APAF1O14727 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
APAF1O14727 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
APAF1O14727 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
APAF1O14727 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
APAF1O14727 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
APAF1O14727 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC23.94■■□□□ 1.42
APAF1O14727 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
APAF1O14727 AL645929.1-201ENST00000420084 975 ntBASIC23.94■■□□□ 1.42
APAF1O14727 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
APAF1O14727 CD320-202ENST00000537716 1119 ntTSL 2 BASIC23.94■■□□□ 1.42
APAF1O14727 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC23.94■■□□□ 1.42
APAF1O14727 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC23.94■■□□□ 1.42
APAF1O14727 AC005332.3-201ENST00000589904 676 ntBASIC23.94■■□□□ 1.42
APAF1O14727 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC23.94■■□□□ 1.42
APAF1O14727 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
APAF1O14727 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms