Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX39AO00148 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DDX39AO00148 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.47■□□□□ 0.87
DDX39AO00148 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
DDX39AO00148 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX39AO00148 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
DDX39AO00148 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX39AO00148 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
DDX39AO00148 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DDX39AO00148 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DDX39AO00148 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX39AO00148 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX39AO00148 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.46■□□□□ 0.87
DDX39AO00148 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
DDX39AO00148 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.46■□□□□ 0.87
DDX39AO00148 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX39AO00148 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
DDX39AO00148 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
DDX39AO00148 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DDX39AO00148 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.46■□□□□ 0.87
DDX39AO00148 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.46■□□□□ 0.87
DDX39AO00148 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX39AO00148 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX39AO00148 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DDX39AO00148 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.46■□□□□ 0.87
DDX39AO00148 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.46■□□□□ 0.87
DDX39AO00148 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DDX39AO00148 DRAXINP1-201ENST00000437611 948 ntBASIC20.46■□□□□ 0.87
DDX39AO00148 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.46■□□□□ 0.87
DDX39AO00148 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.46■□□□□ 0.87
DDX39AO00148 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.46■□□□□ 0.87
DDX39AO00148 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX39AO00148 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.46■□□□□ 0.87
DDX39AO00148 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.46■□□□□ 0.87
DDX39AO00148 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX39AO00148 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX39AO00148 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX39AO00148 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX39AO00148 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DDX39AO00148 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.46■□□□□ 0.87
DDX39AO00148 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX39AO00148 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.45■□□□□ 0.87
DDX39AO00148 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.87
DDX39AO00148 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX39AO00148 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
DDX39AO00148 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX39AO00148 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX39AO00148 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX39AO00148 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX39AO00148 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX39AO00148 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX39AO00148 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DDX39AO00148 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DDX39AO00148 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.45■□□□□ 0.86
DDX39AO00148 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX39AO00148 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DDX39AO00148 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
DDX39AO00148 PRELID1P1-202ENST00000567272 903 ntBASIC20.45■□□□□ 0.86
DDX39AO00148 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.45■□□□□ 0.86
DDX39AO00148 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DDX39AO00148 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX39AO00148 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX39AO00148 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX39AO00148 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
DDX39AO00148 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX39AO00148 LINC00167-201ENST00000530583 1419 ntBASIC20.44■□□□□ 0.86
DDX39AO00148 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.44■□□□□ 0.86
DDX39AO00148 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DDX39AO00148 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DDX39AO00148 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DDX39AO00148 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
DDX39AO00148 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.44■□□□□ 0.86
DDX39AO00148 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.44■□□□□ 0.86
DDX39AO00148 AC073592.3-201ENST00000625118 1834 ntBASIC20.44■□□□□ 0.86
DDX39AO00148 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
DDX39AO00148 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DDX39AO00148 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
DDX39AO00148 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DDX39AO00148 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DDX39AO00148 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DDX39AO00148 AC091607.1-201ENST00000490318 1060 ntBASIC20.44■□□□□ 0.86
DDX39AO00148 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.44■□□□□ 0.86
DDX39AO00148 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DDX39AO00148 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.44■□□□□ 0.86
DDX39AO00148 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.44■□□□□ 0.86
DDX39AO00148 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.44■□□□□ 0.86
DDX39AO00148 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.44■□□□□ 0.86
DDX39AO00148 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DDX39AO00148 AC104581.1-202ENST00000635932 2618 ntBASIC20.44■□□□□ 0.86
DDX39AO00148 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.44■□□□□ 0.86
DDX39AO00148 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DDX39AO00148 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DDX39AO00148 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.44■□□□□ 0.86
DDX39AO00148 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.44■□□□□ 0.86
DDX39AO00148 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.44■□□□□ 0.86
DDX39AO00148 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
DDX39AO00148 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
DDX39AO00148 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DDX39AO00148 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX39AO00148 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms