Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SRRM3A6NNA2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SRRM3A6NNA2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SRRM3A6NNA2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SRRM3A6NNA2 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SRRM3A6NNA2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SRRM3A6NNA2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.91■□□□□ 0.62
SRRM3A6NNA2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SRRM3A6NNA2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.91■□□□□ 0.62
SRRM3A6NNA2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.91■□□□□ 0.62
SRRM3A6NNA2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.91■□□□□ 0.62
SRRM3A6NNA2 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SRRM3A6NNA2 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.91■□□□□ 0.62
SRRM3A6NNA2 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.91■□□□□ 0.62
SRRM3A6NNA2 KRT18P16-201ENST00000510337 1294 ntBASIC18.91■□□□□ 0.62
SRRM3A6NNA2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.91■□□□□ 0.62
SRRM3A6NNA2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.91■□□□□ 0.62
SRRM3A6NNA2 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.91■□□□□ 0.62
SRRM3A6NNA2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SRRM3A6NNA2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
SRRM3A6NNA2 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SRRM3A6NNA2 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SRRM3A6NNA2 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SRRM3A6NNA2 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SRRM3A6NNA2 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.91■□□□□ 0.62
SRRM3A6NNA2 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.91■□□□□ 0.62
SRRM3A6NNA2 KRT16P1-201ENST00000399124 1418 ntBASIC18.91■□□□□ 0.62
SRRM3A6NNA2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SRRM3A6NNA2 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SRRM3A6NNA2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
SRRM3A6NNA2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SRRM3A6NNA2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.9■□□□□ 0.62
SRRM3A6NNA2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRRM3A6NNA2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SRRM3A6NNA2 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRRM3A6NNA2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.9■□□□□ 0.62
SRRM3A6NNA2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.9■□□□□ 0.62
SRRM3A6NNA2 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRRM3A6NNA2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.9■□□□□ 0.62
SRRM3A6NNA2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.9■□□□□ 0.62
SRRM3A6NNA2 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRRM3A6NNA2 TSPY5P-201ENST00000426936 936 ntBASIC18.9■□□□□ 0.62
SRRM3A6NNA2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.9■□□□□ 0.62
SRRM3A6NNA2 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRRM3A6NNA2 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.9■□□□□ 0.62
SRRM3A6NNA2 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SRRM3A6NNA2 FAM87A-204ENST00000613235 858 ntBASIC18.9■□□□□ 0.62
SRRM3A6NNA2 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.9■□□□□ 0.62
SRRM3A6NNA2 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.9■□□□□ 0.62
SRRM3A6NNA2 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SRRM3A6NNA2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SRRM3A6NNA2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SRRM3A6NNA2 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.9■□□□□ 0.62
SRRM3A6NNA2 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRRM3A6NNA2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRRM3A6NNA2 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.9■□□□□ 0.62
SRRM3A6NNA2 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SRRM3A6NNA2 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRRM3A6NNA2 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SRRM3A6NNA2 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.9■□□□□ 0.62
SRRM3A6NNA2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SRRM3A6NNA2 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
SRRM3A6NNA2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SRRM3A6NNA2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
SRRM3A6NNA2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SRRM3A6NNA2 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SRRM3A6NNA2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
SRRM3A6NNA2 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SRRM3A6NNA2 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
SRRM3A6NNA2 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRRM3A6NNA2 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.89■□□□□ 0.61
SRRM3A6NNA2 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SRRM3A6NNA2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRRM3A6NNA2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.89■□□□□ 0.61
SRRM3A6NNA2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRRM3A6NNA2 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.89■□□□□ 0.61
SRRM3A6NNA2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SRRM3A6NNA2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRRM3A6NNA2 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.89■□□□□ 0.61
SRRM3A6NNA2 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.89■□□□□ 0.61
SRRM3A6NNA2 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SRRM3A6NNA2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.89■□□□□ 0.61
SRRM3A6NNA2 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRRM3A6NNA2 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.89■□□□□ 0.61
SRRM3A6NNA2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SRRM3A6NNA2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
SRRM3A6NNA2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRRM3A6NNA2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRRM3A6NNA2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SRRM3A6NNA2 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.89■□□□□ 0.61
SRRM3A6NNA2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SRRM3A6NNA2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.89■□□□□ 0.61
SRRM3A6NNA2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SRRM3A6NNA2 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRRM3A6NNA2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SRRM3A6NNA2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRRM3A6NNA2 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SRRM3A6NNA2 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.89■□□□□ 0.61
SRRM3A6NNA2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.88■□□□□ 0.61
SRRM3A6NNA2 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms