Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF25A6NGN4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF25A6NGN4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF25A6NGN4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF25A6NGN4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.1■□□□□ 0.33
PRAMEF25A6NGN4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.1■□□□□ 0.33
PRAMEF25A6NGN4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF25A6NGN4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF25A6NGN4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF25A6NGN4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF25A6NGN4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF25A6NGN4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF25A6NGN4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF25A6NGN4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF25A6NGN4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.1■□□□□ 0.33
PRAMEF25A6NGN4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.1■□□□□ 0.33
PRAMEF25A6NGN4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PRAMEF25A6NGN4 COX11P1-201ENST00000489116 835 ntBASIC17.1■□□□□ 0.33
PRAMEF25A6NGN4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.1■□□□□ 0.33
PRAMEF25A6NGN4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PRAMEF25A6NGN4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF25A6NGN4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PRAMEF25A6NGN4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF25A6NGN4 FZD10-202ENST00000539839 3282 ntBASIC17.1■□□□□ 0.33
PRAMEF25A6NGN4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF25A6NGN4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF25A6NGN4 AC099343.3-201ENST00000605834 2503 ntBASIC17.1■□□□□ 0.33
PRAMEF25A6NGN4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF25A6NGN4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF25A6NGN4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF25A6NGN4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF25A6NGN4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.09■□□□□ 0.33
PRAMEF25A6NGN4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.09■□□□□ 0.33
PRAMEF25A6NGN4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF25A6NGN4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.09■□□□□ 0.33
PRAMEF25A6NGN4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.09■□□□□ 0.33
PRAMEF25A6NGN4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF25A6NGN4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PRAMEF25A6NGN4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF25A6NGN4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF25A6NGN4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PRAMEF25A6NGN4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.09■□□□□ 0.33
PRAMEF25A6NGN4 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.09■□□□□ 0.33
PRAMEF25A6NGN4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.09■□□□□ 0.33
PRAMEF25A6NGN4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PRAMEF25A6NGN4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.09■□□□□ 0.33
PRAMEF25A6NGN4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.09■□□□□ 0.33
PRAMEF25A6NGN4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.09■□□□□ 0.33
PRAMEF25A6NGN4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.09■□□□□ 0.33
PRAMEF25A6NGN4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.09■□□□□ 0.33
PRAMEF25A6NGN4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF25A6NGN4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF25A6NGN4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.09■□□□□ 0.33
PRAMEF25A6NGN4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF25A6NGN4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.09■□□□□ 0.33
PRAMEF25A6NGN4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF25A6NGN4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF25A6NGN4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.09■□□□□ 0.33
PRAMEF25A6NGN4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF25A6NGN4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF25A6NGN4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF25A6NGN4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.08■□□□□ 0.33
PRAMEF25A6NGN4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.08■□□□□ 0.33
PRAMEF25A6NGN4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRAMEF25A6NGN4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.08■□□□□ 0.33
PRAMEF25A6NGN4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.08■□□□□ 0.33
PRAMEF25A6NGN4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRAMEF25A6NGN4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.08■□□□□ 0.33
PRAMEF25A6NGN4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.08■□□□□ 0.33
PRAMEF25A6NGN4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRAMEF25A6NGN4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PRAMEF25A6NGN4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRAMEF25A6NGN4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.08■□□□□ 0.32
PRAMEF25A6NGN4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
PRAMEF25A6NGN4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.08■□□□□ 0.32
PRAMEF25A6NGN4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF25A6NGN4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.08■□□□□ 0.32
PRAMEF25A6NGN4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF25A6NGN4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF25A6NGN4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF25A6NGN4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.08■□□□□ 0.32
PRAMEF25A6NGN4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.08■□□□□ 0.32
PRAMEF25A6NGN4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF25A6NGN4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.08■□□□□ 0.32
PRAMEF25A6NGN4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.08■□□□□ 0.32
PRAMEF25A6NGN4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.08■□□□□ 0.32
PRAMEF25A6NGN4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.08■□□□□ 0.32
PRAMEF25A6NGN4 AC139887.4-201ENST00000607877 719 ntBASIC17.08■□□□□ 0.32
PRAMEF25A6NGN4 AL023973.1-201ENST00000624619 620 ntBASIC17.08■□□□□ 0.32
PRAMEF25A6NGN4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF25A6NGN4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF25A6NGN4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
PRAMEF25A6NGN4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF25A6NGN4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF25A6NGN4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF25A6NGN4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms