Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.19■□□□□ 0.98
CCDC196A0A1B0GTZ2 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.19■□□□□ 0.98
CCDC196A0A1B0GTZ2 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.19■□□□□ 0.98
CCDC196A0A1B0GTZ2 HYMAI.1-201ENST00000620949 238 ntBASIC21.19■□□□□ 0.98
CCDC196A0A1B0GTZ2 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC196A0A1B0GTZ2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC196A0A1B0GTZ2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC196A0A1B0GTZ2 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC196A0A1B0GTZ2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC196A0A1B0GTZ2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CCDC196A0A1B0GTZ2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC196A0A1B0GTZ2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC196A0A1B0GTZ2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC196A0A1B0GTZ2 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC196A0A1B0GTZ2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC196A0A1B0GTZ2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC196A0A1B0GTZ2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CCDC196A0A1B0GTZ2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC196A0A1B0GTZ2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC196A0A1B0GTZ2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC196A0A1B0GTZ2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC196A0A1B0GTZ2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC196A0A1B0GTZ2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC196A0A1B0GTZ2 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC196A0A1B0GTZ2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CCDC196A0A1B0GTZ2 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC196A0A1B0GTZ2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC196A0A1B0GTZ2 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC196A0A1B0GTZ2 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.18■□□□□ 0.98
CCDC196A0A1B0GTZ2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC196A0A1B0GTZ2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC196A0A1B0GTZ2 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC196A0A1B0GTZ2 AL049597.2-201ENST00000565575 961 ntBASIC21.18■□□□□ 0.98
CCDC196A0A1B0GTZ2 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.18■□□□□ 0.98
CCDC196A0A1B0GTZ2 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CCDC196A0A1B0GTZ2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC196A0A1B0GTZ2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC196A0A1B0GTZ2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC196A0A1B0GTZ2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CCDC196A0A1B0GTZ2 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC196A0A1B0GTZ2 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC196A0A1B0GTZ2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC196A0A1B0GTZ2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC196A0A1B0GTZ2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC196A0A1B0GTZ2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC196A0A1B0GTZ2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CCDC196A0A1B0GTZ2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCDC196A0A1B0GTZ2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC196A0A1B0GTZ2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
CCDC196A0A1B0GTZ2 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCDC196A0A1B0GTZ2 KRT18P48-201ENST00000434763 852 ntBASIC21.17■□□□□ 0.98
CCDC196A0A1B0GTZ2 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC196A0A1B0GTZ2 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.17■□□□□ 0.98
CCDC196A0A1B0GTZ2 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC196A0A1B0GTZ2 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC196A0A1B0GTZ2 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC196A0A1B0GTZ2 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC196A0A1B0GTZ2 LINC01311-201ENST00000565162 1445 ntBASIC21.17■□□□□ 0.98
CCDC196A0A1B0GTZ2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC196A0A1B0GTZ2 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC196A0A1B0GTZ2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC196A0A1B0GTZ2 REXO1L9P-201ENST00000604264 2108 ntBASIC21.17■□□□□ 0.98
CCDC196A0A1B0GTZ2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCDC196A0A1B0GTZ2 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC196A0A1B0GTZ2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC196A0A1B0GTZ2 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC196A0A1B0GTZ2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC196A0A1B0GTZ2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC196A0A1B0GTZ2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC196A0A1B0GTZ2 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CCDC196A0A1B0GTZ2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC196A0A1B0GTZ2 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC196A0A1B0GTZ2 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC196A0A1B0GTZ2 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC196A0A1B0GTZ2 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC196A0A1B0GTZ2 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC196A0A1B0GTZ2 MIR662-201ENST00000384847 95 ntBASIC21.16■□□□□ 0.98
CCDC196A0A1B0GTZ2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC196A0A1B0GTZ2 AL671277.2-201ENST00000458060 996 ntBASIC21.16■□□□□ 0.98
CCDC196A0A1B0GTZ2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.16■□□□□ 0.98
CCDC196A0A1B0GTZ2 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC196A0A1B0GTZ2 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC196A0A1B0GTZ2 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.16■□□□□ 0.98
CCDC196A0A1B0GTZ2 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.16■□□□□ 0.98
CCDC196A0A1B0GTZ2 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC196A0A1B0GTZ2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC196A0A1B0GTZ2 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC196A0A1B0GTZ2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CCDC196A0A1B0GTZ2 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CCDC196A0A1B0GTZ2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC196A0A1B0GTZ2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC196A0A1B0GTZ2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC196A0A1B0GTZ2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC196A0A1B0GTZ2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC196A0A1B0GTZ2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC196A0A1B0GTZ2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CCDC196A0A1B0GTZ2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC196A0A1B0GTZ2 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC196A0A1B0GTZ2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC196A0A1B0GTZ2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms