Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC12.05□□□□□ -0.48
TRAV13-2A0A0B4J235 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 SNCG-201ENST00000348795 684 ntTSL 2 BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 AC096631.2-201ENST00000436136 790 ntBASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 TUBB8P6-201ENST00000436895 1288 ntBASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 MAX-217ENST00000557277 728 ntTSL 3 BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 AC069236.1-201ENST00000604339 616 ntBASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 AC124283.5-201ENST00000624661 1809 ntBASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC12.04□□□□□ -0.48
TRAV13-2A0A0B4J235 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 SERP1-205ENST00000487153 657 ntTSL 4 BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 AC008694.1-202ENST00000636953 945 ntBASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms