Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
TRAV26-1A0A087WT03 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 LIN28AP1-201ENST00000429574 405 ntBASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 GPX4-207ENST00000589115 812 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 AC005363.2-201ENST00000618631 242 ntBASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 AC010653.2-201ENST00000623505 997 ntBASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC13.22□□□□□ -0.29
TRAV26-1A0A087WT03 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
TRAV26-1A0A087WT03 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV26-1A0A087WT03 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV26-1A0A087WT03 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV26-1A0A087WT03 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV26-1A0A087WT03 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
TRAV26-1A0A087WT03 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC13.21□□□□□ -0.29
TRAV26-1A0A087WT03 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV26-1A0A087WT03 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV26-1A0A087WT03 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV26-1A0A087WT03 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
TRAV26-1A0A087WT03 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV26-1A0A087WT03 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV26-1A0A087WT03 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV26-1A0A087WT03 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV26-1A0A087WT03 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV26-1A0A087WT03 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC13.21□□□□□ -0.29
TRAV26-1A0A087WT03 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV26-1A0A087WT03 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV26-1A0A087WT03 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
TRAV26-1A0A087WT03 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV26-1A0A087WT03 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV26-1A0A087WT03 ATP5G1P1-201ENST00000448724 379 ntBASIC13.21□□□□□ -0.29
TRAV26-1A0A087WT03 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV26-1A0A087WT03 GXYLT1P6-201ENST00000456472 1187 ntBASIC13.21□□□□□ -0.29
TRAV26-1A0A087WT03 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
TRAV26-1A0A087WT03 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV26-1A0A087WT03 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC13.21□□□□□ -0.29
TRAV26-1A0A087WT03 AC008622.2-201ENST00000617006 1229 ntBASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms