Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN10AQ9Y5Y9 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 NKAPP1-205ENST00000585790 367 ntBASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 AC107918.4-202ENST00000641623 219 ntBASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 AL356488.2-201ENST00000602755 427 ntBASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCN10AQ9Y5Y9 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
SCN10AQ9Y5Y9 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.89■□□□□ 0.78
SCN10AQ9Y5Y9 AC010460.3-201ENST00000511359 1579 ntBASIC19.89■□□□□ 0.77
SCN10AQ9Y5Y9 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCN10AQ9Y5Y9 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCN10AQ9Y5Y9 RPS2P28-201ENST00000314255 741 ntBASIC19.89■□□□□ 0.77
SCN10AQ9Y5Y9 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SCN10AQ9Y5Y9 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.89■□□□□ 0.77
SCN10AQ9Y5Y9 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.89■□□□□ 0.77
SCN10AQ9Y5Y9 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.89■□□□□ 0.77
SCN10AQ9Y5Y9 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.89■□□□□ 0.77
SCN10AQ9Y5Y9 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.89■□□□□ 0.77
SCN10AQ9Y5Y9 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.89■□□□□ 0.77
SCN10AQ9Y5Y9 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SCN10AQ9Y5Y9 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCN10AQ9Y5Y9 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SCN10AQ9Y5Y9 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
SCN10AQ9Y5Y9 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCN10AQ9Y5Y9 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.89■□□□□ 0.77
SCN10AQ9Y5Y9 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SCN10AQ9Y5Y9 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCN10AQ9Y5Y9 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCN10AQ9Y5Y9 ESPNP-201ENST00000270691 2015 ntBASIC19.88■□□□□ 0.77
SCN10AQ9Y5Y9 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SCN10AQ9Y5Y9 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SCN10AQ9Y5Y9 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.88■□□□□ 0.77
SCN10AQ9Y5Y9 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.88■□□□□ 0.77
SCN10AQ9Y5Y9 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.88■□□□□ 0.77
SCN10AQ9Y5Y9 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
SCN10AQ9Y5Y9 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
SCN10AQ9Y5Y9 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SCN10AQ9Y5Y9 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCN10AQ9Y5Y9 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SCN10AQ9Y5Y9 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SCN10AQ9Y5Y9 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCN10AQ9Y5Y9 AC073130.3-201ENST00000624389 2278 ntBASIC19.88■□□□□ 0.77
SCN10AQ9Y5Y9 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.88■□□□□ 0.77
SCN10AQ9Y5Y9 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCN10AQ9Y5Y9 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.88■□□□□ 0.77
SCN10AQ9Y5Y9 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.88■□□□□ 0.77
SCN10AQ9Y5Y9 YBX2P1-201ENST00000394192 760 ntBASIC19.88■□□□□ 0.77
SCN10AQ9Y5Y9 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.88■□□□□ 0.77
SCN10AQ9Y5Y9 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.88■□□□□ 0.77
SCN10AQ9Y5Y9 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCN10AQ9Y5Y9 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.88■□□□□ 0.77
SCN10AQ9Y5Y9 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCN10AQ9Y5Y9 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.87■□□□□ 0.77
SCN10AQ9Y5Y9 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SCN10AQ9Y5Y9 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
SCN10AQ9Y5Y9 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SCN10AQ9Y5Y9 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
SCN10AQ9Y5Y9 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
SCN10AQ9Y5Y9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.87■□□□□ 0.77
SCN10AQ9Y5Y9 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCN10AQ9Y5Y9 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCN10AQ9Y5Y9 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.87■□□□□ 0.77
SCN10AQ9Y5Y9 LAGE3P1-201ENST00000425356 484 ntBASIC19.87■□□□□ 0.77
SCN10AQ9Y5Y9 KRT18P27-201ENST00000427733 1299 ntBASIC19.87■□□□□ 0.77
SCN10AQ9Y5Y9 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SCN10AQ9Y5Y9 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.87■□□□□ 0.77
SCN10AQ9Y5Y9 AC055717.3-201ENST00000622967 595 ntBASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms