Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA9Q9Y5G4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA9Q9Y5G4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA9Q9Y5G4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGA9Q9Y5G4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PCDHGA9Q9Y5G4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGA9Q9Y5G4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGA9Q9Y5G4 TEX21P-204ENST00000641479 1693 ntBASIC17.05■□□□□ 0.32
PCDHGA9Q9Y5G4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PCDHGA9Q9Y5G4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA9Q9Y5G4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA9Q9Y5G4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA9Q9Y5G4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGA9Q9Y5G4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA9Q9Y5G4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.05■□□□□ 0.32
PCDHGA9Q9Y5G4 VENTXP7-201ENST00000475503 772 ntBASIC17.05■□□□□ 0.32
PCDHGA9Q9Y5G4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGA9Q9Y5G4 AC138894.3-201ENST00000603787 634 ntBASIC17.05■□□□□ 0.32
PCDHGA9Q9Y5G4 AC023511.2-201ENST00000618803 211 ntBASIC17.05■□□□□ 0.32
PCDHGA9Q9Y5G4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA9Q9Y5G4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA9Q9Y5G4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PCDHGA9Q9Y5G4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PCDHGA9Q9Y5G4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA9Q9Y5G4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA9Q9Y5G4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PCDHGA9Q9Y5G4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHGA9Q9Y5G4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA9Q9Y5G4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCDHGA9Q9Y5G4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHGA9Q9Y5G4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PCDHGA9Q9Y5G4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PCDHGA9Q9Y5G4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA9Q9Y5G4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA9Q9Y5G4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHGA9Q9Y5G4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHGA9Q9Y5G4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.04■□□□□ 0.32
PCDHGA9Q9Y5G4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA9Q9Y5G4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.04■□□□□ 0.32
PCDHGA9Q9Y5G4 AC099336.1-202ENST00000602961 463 ntBASIC17.04■□□□□ 0.32
PCDHGA9Q9Y5G4 GPALPP1-207ENST00000611650 899 ntBASIC17.04■□□□□ 0.32
PCDHGA9Q9Y5G4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.04■□□□□ 0.32
PCDHGA9Q9Y5G4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA9Q9Y5G4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHGA9Q9Y5G4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA9Q9Y5G4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PCDHGA9Q9Y5G4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA9Q9Y5G4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA9Q9Y5G4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA9Q9Y5G4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA9Q9Y5G4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA9Q9Y5G4 KRT89P-201ENST00000620027 1478 ntBASIC17.04■□□□□ 0.32
PCDHGA9Q9Y5G4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
PCDHGA9Q9Y5G4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA9Q9Y5G4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA9Q9Y5G4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA9Q9Y5G4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 IGHV3-47-201ENST00000425060 335 ntBASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 KRT16P4-201ENST00000453883 522 ntBASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 AC024563.2-201ENST00000603282 481 ntBASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 AL592071.1-201ENST00000611956 408 ntBASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 AC009113.1-201ENST00000570267 2443 ntBASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 LINC00167-201ENST00000530583 1419 ntBASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA9Q9Y5G4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHGA9Q9Y5G4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA9Q9Y5G4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHGA9Q9Y5G4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PCDHGA9Q9Y5G4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA9Q9Y5G4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA9Q9Y5G4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA9Q9Y5G4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA9Q9Y5G4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms