Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
AP4S1Q9Y587 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
AP4S1Q9Y587 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.27■□□□□ 0.36
AP4S1Q9Y587 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP4S1Q9Y587 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
AP4S1Q9Y587 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP4S1Q9Y587 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP4S1Q9Y587 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
AP4S1Q9Y587 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP4S1Q9Y587 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP4S1Q9Y587 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 AC018695.7-201ENST00000624587 2492 ntBASIC17.26■□□□□ 0.35
AP4S1Q9Y587 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
AP4S1Q9Y587 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 AC092368.3-202ENST00000574180 1591 ntBASIC17.25■□□□□ 0.35
AP4S1Q9Y587 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 OR6D1P-203ENST00000641209 4860 ntBASIC17.25■□□□□ 0.35
AP4S1Q9Y587 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 KRT18P55-202ENST00000578578 1546 ntBASIC17.25■□□□□ 0.35
AP4S1Q9Y587 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4S1Q9Y587 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 KRT8P11-201ENST00000409686 1436 ntBASIC17.24■□□□□ 0.35
AP4S1Q9Y587 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP4S1Q9Y587 DUSP5P2-201ENST00000426873 1033 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms