Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM17Q9Y577 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TRIM17Q9Y577 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM17Q9Y577 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.54■□□□□ 0.88
TRIM17Q9Y577 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM17Q9Y577 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM17Q9Y577 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM17Q9Y577 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM17Q9Y577 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TRIM17Q9Y577 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.54■□□□□ 0.88
TRIM17Q9Y577 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM17Q9Y577 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM17Q9Y577 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM17Q9Y577 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM17Q9Y577 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM17Q9Y577 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM17Q9Y577 CRYGEP-201ENST00000412192 528 ntBASIC20.54■□□□□ 0.88
TRIM17Q9Y577 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.54■□□□□ 0.88
TRIM17Q9Y577 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.54■□□□□ 0.88
TRIM17Q9Y577 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.54■□□□□ 0.88
TRIM17Q9Y577 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM17Q9Y577 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.54■□□□□ 0.88
TRIM17Q9Y577 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM17Q9Y577 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM17Q9Y577 TCF3P1-201ENST00000423021 1937 ntBASIC20.54■□□□□ 0.88
TRIM17Q9Y577 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM17Q9Y577 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM17Q9Y577 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM17Q9Y577 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.54■□□□□ 0.88
TRIM17Q9Y577 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM17Q9Y577 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM17Q9Y577 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
TRIM17Q9Y577 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM17Q9Y577 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 MIR149-201ENST00000384879 89 ntBASIC20.53■□□□□ 0.88
TRIM17Q9Y577 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 AC093512.1-201ENST00000617969 520 ntBASIC20.53■□□□□ 0.88
TRIM17Q9Y577 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM17Q9Y577 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
TRIM17Q9Y577 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM17Q9Y577 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM17Q9Y577 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM17Q9Y577 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIM17Q9Y577 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIM17Q9Y577 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM17Q9Y577 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.52■□□□□ 0.88
TRIM17Q9Y577 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIM17Q9Y577 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM17Q9Y577 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM17Q9Y577 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.52■□□□□ 0.88
TRIM17Q9Y577 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIM17Q9Y577 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.52■□□□□ 0.88
TRIM17Q9Y577 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM17Q9Y577 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIM17Q9Y577 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM17Q9Y577 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms