Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 AP002982.1-201ENST00000492365 877 ntBASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 AC233263.1-201ENST00000578059 224 ntBASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 AL353708.3-201ENST00000610272 989 ntBASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 AC011298.2-201ENST00000617989 482 ntBASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 AC034236.2-201ENST00000606662 1610 ntBASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC12.73□□□□□ -0.37
UBE2D4Q9Y2X8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 SERF2-207ENST00000409614 582 ntTSL 2 BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 KSR1P1-201ENST00000446298 240 ntBASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 RPS2P4-201ENST00000476944 856 ntBASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 AC026366.1-201ENST00000488803 879 ntBASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 AC026271.3-201ENST00000571884 352 ntBASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 ABBA01031674.1-201ENST00000635145 728 ntBASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBE2D4Q9Y2X8 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 KRT8P50-201ENST00000562022 1438 ntBASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms