Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.61■□□□□ 0.73
SSX2IPQ9Y2D8 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.61■□□□□ 0.73
SSX2IPQ9Y2D8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.61■□□□□ 0.73
SSX2IPQ9Y2D8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSX2IPQ9Y2D8 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SSX2IPQ9Y2D8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SSX2IPQ9Y2D8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SSX2IPQ9Y2D8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SSX2IPQ9Y2D8 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.61■□□□□ 0.73
SSX2IPQ9Y2D8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSX2IPQ9Y2D8 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSX2IPQ9Y2D8 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SSX2IPQ9Y2D8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSX2IPQ9Y2D8 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SSX2IPQ9Y2D8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.6■□□□□ 0.73
SSX2IPQ9Y2D8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSX2IPQ9Y2D8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.6■□□□□ 0.73
SSX2IPQ9Y2D8 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.6■□□□□ 0.73
SSX2IPQ9Y2D8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SSX2IPQ9Y2D8 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSX2IPQ9Y2D8 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSX2IPQ9Y2D8 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SSX2IPQ9Y2D8 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSX2IPQ9Y2D8 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.6■□□□□ 0.73
SSX2IPQ9Y2D8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.6■□□□□ 0.73
SSX2IPQ9Y2D8 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
SSX2IPQ9Y2D8 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SSX2IPQ9Y2D8 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
SSX2IPQ9Y2D8 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SSX2IPQ9Y2D8 AL592071.1-201ENST00000611956 408 ntBASIC19.6■□□□□ 0.73
SSX2IPQ9Y2D8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSX2IPQ9Y2D8 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSX2IPQ9Y2D8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSX2IPQ9Y2D8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SSX2IPQ9Y2D8 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSX2IPQ9Y2D8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSX2IPQ9Y2D8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSX2IPQ9Y2D8 LETM1P2-201ENST00000597330 2178 ntBASIC19.6■□□□□ 0.73
SSX2IPQ9Y2D8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSX2IPQ9Y2D8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSX2IPQ9Y2D8 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSX2IPQ9Y2D8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.59■□□□□ 0.73
SSX2IPQ9Y2D8 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SSX2IPQ9Y2D8 AL353692.3-201ENST00000407031 1396 ntBASIC19.59■□□□□ 0.73
SSX2IPQ9Y2D8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SSX2IPQ9Y2D8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SSX2IPQ9Y2D8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
SSX2IPQ9Y2D8 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSX2IPQ9Y2D8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.59■□□□□ 0.73
SSX2IPQ9Y2D8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SSX2IPQ9Y2D8 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SSX2IPQ9Y2D8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.59■□□□□ 0.73
SSX2IPQ9Y2D8 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
SSX2IPQ9Y2D8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSX2IPQ9Y2D8 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.59■□□□□ 0.73
SSX2IPQ9Y2D8 RN7SL606P-201ENST00000472779 293 ntBASIC19.59■□□□□ 0.73
SSX2IPQ9Y2D8 KRT18P41-201ENST00000518924 1277 ntBASIC19.59■□□□□ 0.73
SSX2IPQ9Y2D8 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.59■□□□□ 0.73
SSX2IPQ9Y2D8 AC099336.1-202ENST00000602961 463 ntBASIC19.59■□□□□ 0.73
SSX2IPQ9Y2D8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SSX2IPQ9Y2D8 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.59■□□□□ 0.73
SSX2IPQ9Y2D8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSX2IPQ9Y2D8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.59■□□□□ 0.73
SSX2IPQ9Y2D8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSX2IPQ9Y2D8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSX2IPQ9Y2D8 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SSX2IPQ9Y2D8 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
SSX2IPQ9Y2D8 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.59■□□□□ 0.73
SSX2IPQ9Y2D8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSX2IPQ9Y2D8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.58■□□□□ 0.73
SSX2IPQ9Y2D8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SSX2IPQ9Y2D8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSX2IPQ9Y2D8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSX2IPQ9Y2D8 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
SSX2IPQ9Y2D8 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSX2IPQ9Y2D8 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
SSX2IPQ9Y2D8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSX2IPQ9Y2D8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSX2IPQ9Y2D8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSX2IPQ9Y2D8 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.58■□□□□ 0.72
SSX2IPQ9Y2D8 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.58■□□□□ 0.72
SSX2IPQ9Y2D8 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.58■□□□□ 0.72
SSX2IPQ9Y2D8 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.58■□□□□ 0.72
SSX2IPQ9Y2D8 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSX2IPQ9Y2D8 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.58■□□□□ 0.72
SSX2IPQ9Y2D8 AL031008.1-201ENST00000619963 541 ntBASIC19.58■□□□□ 0.72
SSX2IPQ9Y2D8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.58■□□□□ 0.72
SSX2IPQ9Y2D8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SSX2IPQ9Y2D8 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSX2IPQ9Y2D8 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSX2IPQ9Y2D8 HEIH-201ENST00000623091 1652 ntBASIC19.58■□□□□ 0.72
SSX2IPQ9Y2D8 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSX2IPQ9Y2D8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SSX2IPQ9Y2D8 LINC00167-201ENST00000530583 1419 ntBASIC19.58■□□□□ 0.72
SSX2IPQ9Y2D8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSX2IPQ9Y2D8 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSX2IPQ9Y2D8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.58■□□□□ 0.72
SSX2IPQ9Y2D8 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.58■□□□□ 0.72
SSX2IPQ9Y2D8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSX2IPQ9Y2D8 AC005332.7-201ENST00000614046 2005 ntBASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms