Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.16■□□□□ 0.5
VPS9D1Q9Y2B5 AC034232.1-201ENST00000506026 1064 ntBASIC18.16■□□□□ 0.5
VPS9D1Q9Y2B5 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.16■□□□□ 0.5
VPS9D1Q9Y2B5 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.16■□□□□ 0.5
VPS9D1Q9Y2B5 MIR3917-201ENST00000580971 93 ntBASIC18.16■□□□□ 0.5
VPS9D1Q9Y2B5 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VPS9D1Q9Y2B5 AC141257.4-201ENST00000634557 245 ntBASIC18.16■□□□□ 0.5
VPS9D1Q9Y2B5 AC136944.6-201ENST00000634818 245 ntBASIC18.16■□□□□ 0.5
VPS9D1Q9Y2B5 AL031432.5-201ENST00000641059 760 ntBASIC18.16■□□□□ 0.5
VPS9D1Q9Y2B5 AL096828.2-201ENST00000567259 1965 ntBASIC18.16■□□□□ 0.5
VPS9D1Q9Y2B5 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS9D1Q9Y2B5 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS9D1Q9Y2B5 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.16■□□□□ 0.5
VPS9D1Q9Y2B5 PHGDH-209ENST00000641074 1780 ntBASIC18.16■□□□□ 0.5
VPS9D1Q9Y2B5 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
VPS9D1Q9Y2B5 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.16■□□□□ 0.5
VPS9D1Q9Y2B5 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS9D1Q9Y2B5 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.16■□□□□ 0.5
VPS9D1Q9Y2B5 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
VPS9D1Q9Y2B5 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VPS9D1Q9Y2B5 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS9D1Q9Y2B5 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VPS9D1Q9Y2B5 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VPS9D1Q9Y2B5 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS9D1Q9Y2B5 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.16■□□□□ 0.5
VPS9D1Q9Y2B5 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
VPS9D1Q9Y2B5 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS9D1Q9Y2B5 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
VPS9D1Q9Y2B5 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VPS9D1Q9Y2B5 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.15■□□□□ 0.5
VPS9D1Q9Y2B5 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VPS9D1Q9Y2B5 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.15■□□□□ 0.5
VPS9D1Q9Y2B5 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VPS9D1Q9Y2B5 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.15■□□□□ 0.5
VPS9D1Q9Y2B5 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VPS9D1Q9Y2B5 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VPS9D1Q9Y2B5 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.15■□□□□ 0.5
VPS9D1Q9Y2B5 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
VPS9D1Q9Y2B5 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
VPS9D1Q9Y2B5 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VPS9D1Q9Y2B5 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.15■□□□□ 0.5
VPS9D1Q9Y2B5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.15■□□□□ 0.5
VPS9D1Q9Y2B5 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.15■□□□□ 0.5
VPS9D1Q9Y2B5 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
VPS9D1Q9Y2B5 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
VPS9D1Q9Y2B5 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
VPS9D1Q9Y2B5 AC073912.3-201ENST00000624414 853 ntBASIC18.15■□□□□ 0.5
VPS9D1Q9Y2B5 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.15■□□□□ 0.5
VPS9D1Q9Y2B5 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VPS9D1Q9Y2B5 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VPS9D1Q9Y2B5 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VPS9D1Q9Y2B5 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VPS9D1Q9Y2B5 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
VPS9D1Q9Y2B5 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VPS9D1Q9Y2B5 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VPS9D1Q9Y2B5 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VPS9D1Q9Y2B5 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
VPS9D1Q9Y2B5 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
VPS9D1Q9Y2B5 REXO1L9P-201ENST00000604264 2108 ntBASIC18.14■□□□□ 0.5
VPS9D1Q9Y2B5 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
VPS9D1Q9Y2B5 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
VPS9D1Q9Y2B5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 SLC25A3P1-201ENST00000443844 931 ntBASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 ATP5G1P1-201ENST00000448724 379 ntBASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS9D1Q9Y2B5 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms