Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CDK11AQ9UQ88 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CDK11AQ9UQ88 AL139288.1-201ENST00000623748 933 ntBASIC28.12■■■□□ 2.09
CDK11AQ9UQ88 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CDK11AQ9UQ88 ADM-207ENST00000530439 1839 ntTSL 2 BASIC28.12■■■□□ 2.09
CDK11AQ9UQ88 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CDK11AQ9UQ88 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
CDK11AQ9UQ88 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CDK11AQ9UQ88 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC28.11■■■□□ 2.09
CDK11AQ9UQ88 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CDK11AQ9UQ88 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
CDK11AQ9UQ88 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC28.11■■■□□ 2.09
CDK11AQ9UQ88 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CDK11AQ9UQ88 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CDK11AQ9UQ88 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CDK11AQ9UQ88 CSF3-203ENST00000394148 622 ntTSL 3 BASIC28.11■■■□□ 2.09
CDK11AQ9UQ88 MIR940-201ENST00000401276 94 ntBASIC28.11■■■□□ 2.09
CDK11AQ9UQ88 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
CDK11AQ9UQ88 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CDK11AQ9UQ88 RPS2P1-201ENST00000434010 821 ntBASIC28.11■■■□□ 2.09
CDK11AQ9UQ88 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC28.11■■■□□ 2.09
CDK11AQ9UQ88 PNMT-203ENST00000581428 677 ntTSL 2 BASIC28.11■■■□□ 2.09
CDK11AQ9UQ88 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
CDK11AQ9UQ88 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CDK11AQ9UQ88 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC28.11■■■□□ 2.09
CDK11AQ9UQ88 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC28.11■■■□□ 2.09
CDK11AQ9UQ88 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
CDK11AQ9UQ88 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC28.11■■■□□ 2.09
CDK11AQ9UQ88 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC28.11■■■□□ 2.09
CDK11AQ9UQ88 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CDK11AQ9UQ88 COBL-210ENST00000632460 1941 ntTSL 5 BASIC28.1■■■□□ 2.09
CDK11AQ9UQ88 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC28.1■■■□□ 2.09
CDK11AQ9UQ88 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
CDK11AQ9UQ88 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CDK11AQ9UQ88 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CDK11AQ9UQ88 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC28.1■■■□□ 2.09
CDK11AQ9UQ88 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CDK11AQ9UQ88 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC28.1■■■□□ 2.09
CDK11AQ9UQ88 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC28.1■■■□□ 2.09
CDK11AQ9UQ88 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CDK11AQ9UQ88 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC28.1■■■□□ 2.09
CDK11AQ9UQ88 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC28.1■■■□□ 2.09
CDK11AQ9UQ88 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC28.1■■■□□ 2.09
CDK11AQ9UQ88 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CDK11AQ9UQ88 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CDK11AQ9UQ88 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC28.09■■■□□ 2.09
CDK11AQ9UQ88 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
CDK11AQ9UQ88 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CDK11AQ9UQ88 RAB17-203ENST00000409576 466 ntTSL 3 BASIC28.09■■■□□ 2.09
CDK11AQ9UQ88 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
CDK11AQ9UQ88 PGAM5P1-201ENST00000518923 814 ntBASIC28.09■■■□□ 2.09
CDK11AQ9UQ88 OR7E14P-202ENST00000530490 1290 ntBASIC28.09■■■□□ 2.09
CDK11AQ9UQ88 AC027601.4-201ENST00000611259 610 ntBASIC28.09■■■□□ 2.09
CDK11AQ9UQ88 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CDK11AQ9UQ88 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC28.09■■■□□ 2.09
CDK11AQ9UQ88 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CDK11AQ9UQ88 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
CDK11AQ9UQ88 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CDK11AQ9UQ88 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
CDK11AQ9UQ88 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CDK11AQ9UQ88 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CDK11AQ9UQ88 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
CDK11AQ9UQ88 SOD2-201ENST00000337404 991 ntTSL 2 BASIC28.08■■■□□ 2.09
CDK11AQ9UQ88 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC28.08■■■□□ 2.09
CDK11AQ9UQ88 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC28.08■■■□□ 2.09
CDK11AQ9UQ88 AC112698.1-201ENST00000510299 916 ntBASIC28.08■■■□□ 2.09
CDK11AQ9UQ88 FAM197Y3-203ENST00000618346 717 ntBASIC28.08■■■□□ 2.09
CDK11AQ9UQ88 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
CDK11AQ9UQ88 AC104109.2-201ENST00000602919 1418 ntBASIC28.08■■■□□ 2.09
CDK11AQ9UQ88 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC28.08■■■□□ 2.09
CDK11AQ9UQ88 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.08
CDK11AQ9UQ88 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.08
CDK11AQ9UQ88 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC28.08■■■□□ 2.08
CDK11AQ9UQ88 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
CDK11AQ9UQ88 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CDK11AQ9UQ88 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC28.07■■■□□ 2.08
CDK11AQ9UQ88 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CDK11AQ9UQ88 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CDK11AQ9UQ88 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CDK11AQ9UQ88 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CDK11AQ9UQ88 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CDK11AQ9UQ88 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CDK11AQ9UQ88 CD9-202ENST00000382515 1229 ntTSL 5 BASIC28.07■■■□□ 2.08
CDK11AQ9UQ88 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC28.07■■■□□ 2.08
CDK11AQ9UQ88 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC28.07■■■□□ 2.08
CDK11AQ9UQ88 AC025062.2-201ENST00000605477 670 ntBASIC28.07■■■□□ 2.08
CDK11AQ9UQ88 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC28.07■■■□□ 2.08
CDK11AQ9UQ88 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC28.07■■■□□ 2.08
CDK11AQ9UQ88 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CDK11AQ9UQ88 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CDK11AQ9UQ88 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CDK11AQ9UQ88 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC28.07■■■□□ 2.08
CDK11AQ9UQ88 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CDK11AQ9UQ88 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CDK11AQ9UQ88 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CDK11AQ9UQ88 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CDK11AQ9UQ88 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
CDK11AQ9UQ88 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CDK11AQ9UQ88 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC28.06■■■□□ 2.08
CDK11AQ9UQ88 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms