Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 KRT18P58-201ENST00000527480 1120 ntBASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 AC138894.3-201ENST00000603787 634 ntBASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 AL353801.3-201ENST00000609898 542 ntBASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 GAS2L1P1-201ENST00000420145 1480 ntBASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
NOTCH3Q9UM47 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 PMS2P1-201ENST00000431037 1228 ntBASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.09□□□□□ -0.15
NOTCH3Q9UM47 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
NOTCH3Q9UM47 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
NOTCH3Q9UM47 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
NOTCH3Q9UM47 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.15
NOTCH3Q9UM47 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
NOTCH3Q9UM47 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.08□□□□□ -0.16
NOTCH3Q9UM47 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NOTCH3Q9UM47 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NOTCH3Q9UM47 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
NOTCH3Q9UM47 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.08□□□□□ -0.16
NOTCH3Q9UM47 AC064862.7-201ENST00000604520 867 ntBASIC14.08□□□□□ -0.16
NOTCH3Q9UM47 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.08□□□□□ -0.16
NOTCH3Q9UM47 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NOTCH3Q9UM47 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.08□□□□□ -0.16
NOTCH3Q9UM47 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NOTCH3Q9UM47 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NOTCH3Q9UM47 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NOTCH3Q9UM47 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NOTCH3Q9UM47 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NOTCH3Q9UM47 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NOTCH3Q9UM47 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NOTCH3Q9UM47 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NOTCH3Q9UM47 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NOTCH3Q9UM47 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NOTCH3Q9UM47 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
NOTCH3Q9UM47 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NOTCH3Q9UM47 KRT18P23-201ENST00000435622 1283 ntBASIC14.08□□□□□ -0.16
NOTCH3Q9UM47 Z69720.1-201ENST00000601483 472 ntBASIC14.08□□□□□ -0.16
NOTCH3Q9UM47 AC008556.1-201ENST00000610908 2040 ntBASIC14.08□□□□□ -0.16
NOTCH3Q9UM47 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.08□□□□□ -0.16
NOTCH3Q9UM47 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms