Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SALL4Q9UJQ4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SALL4Q9UJQ4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.4■□□□□ 0.7
SALL4Q9UJQ4 AC093010.1-201ENST00000473625 1624 ntBASIC19.4■□□□□ 0.7
SALL4Q9UJQ4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SALL4Q9UJQ4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL4Q9UJQ4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL4Q9UJQ4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL4Q9UJQ4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SALL4Q9UJQ4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SALL4Q9UJQ4 MMP23A-201ENST00000234610 1017 ntBASIC19.4■□□□□ 0.7
SALL4Q9UJQ4 AC097488.1-201ENST00000507834 756 ntBASIC19.4■□□□□ 0.7
SALL4Q9UJQ4 KRT18P21-201ENST00000515767 1272 ntBASIC19.4■□□□□ 0.7
SALL4Q9UJQ4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.4■□□□□ 0.7
SALL4Q9UJQ4 DGCR10-201ENST00000609839 495 ntBASIC19.4■□□□□ 0.7
SALL4Q9UJQ4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.4■□□□□ 0.7
SALL4Q9UJQ4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL4Q9UJQ4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL4Q9UJQ4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SALL4Q9UJQ4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL4Q9UJQ4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.4■□□□□ 0.7
SALL4Q9UJQ4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL4Q9UJQ4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SALL4Q9UJQ4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SALL4Q9UJQ4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL4Q9UJQ4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL4Q9UJQ4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SALL4Q9UJQ4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.39■□□□□ 0.7
SALL4Q9UJQ4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SALL4Q9UJQ4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SALL4Q9UJQ4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SALL4Q9UJQ4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SALL4Q9UJQ4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SALL4Q9UJQ4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL4Q9UJQ4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL4Q9UJQ4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SALL4Q9UJQ4 AC106820.2-201ENST00000563775 3264 ntBASIC19.38■□□□□ 0.69
SALL4Q9UJQ4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL4Q9UJQ4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL4Q9UJQ4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL4Q9UJQ4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL4Q9UJQ4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL4Q9UJQ4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL4Q9UJQ4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL4Q9UJQ4 MIR149-201ENST00000384879 89 ntBASIC19.38■□□□□ 0.69
SALL4Q9UJQ4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL4Q9UJQ4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL4Q9UJQ4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL4Q9UJQ4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.38■□□□□ 0.69
SALL4Q9UJQ4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL4Q9UJQ4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL4Q9UJQ4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.38■□□□□ 0.69
SALL4Q9UJQ4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.38■□□□□ 0.69
SALL4Q9UJQ4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SALL4Q9UJQ4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.38■□□□□ 0.69
SALL4Q9UJQ4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.38■□□□□ 0.69
SALL4Q9UJQ4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SALL4Q9UJQ4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SALL4Q9UJQ4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL4Q9UJQ4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.38■□□□□ 0.69
SALL4Q9UJQ4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SALL4Q9UJQ4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SALL4Q9UJQ4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SALL4Q9UJQ4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SALL4Q9UJQ4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms