Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.27■□□□□ 0.36
VAPAQ9P0L0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.27■□□□□ 0.36
VAPAQ9P0L0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.27■□□□□ 0.36
VAPAQ9P0L0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.27■□□□□ 0.36
VAPAQ9P0L0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.27■□□□□ 0.36
VAPAQ9P0L0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.27■□□□□ 0.36
VAPAQ9P0L0 FAM197Y4-202ENST00000622692 608 ntBASIC17.27■□□□□ 0.36
VAPAQ9P0L0 PRORSD1P-202ENST00000563365 2154 ntBASIC17.27■□□□□ 0.36
VAPAQ9P0L0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VAPAQ9P0L0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
VAPAQ9P0L0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
VAPAQ9P0L0 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VAPAQ9P0L0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
VAPAQ9P0L0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
VAPAQ9P0L0 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
VAPAQ9P0L0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.27■□□□□ 0.35
VAPAQ9P0L0 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.27■□□□□ 0.35
VAPAQ9P0L0 AC080080.1-201ENST00000625121 2420 ntBASIC17.27■□□□□ 0.35
VAPAQ9P0L0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
VAPAQ9P0L0 KRT18P55-202ENST00000578578 1546 ntBASIC17.26■□□□□ 0.35
VAPAQ9P0L0 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 AC097488.1-201ENST00000507834 756 ntBASIC17.26■□□□□ 0.35
VAPAQ9P0L0 NUDT16P1-203ENST00000513809 620 ntBASIC17.26■□□□□ 0.35
VAPAQ9P0L0 CD99P1-205ENST00000527459 561 ntBASIC17.26■□□□□ 0.35
VAPAQ9P0L0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.26■□□□□ 0.35
VAPAQ9P0L0 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VAPAQ9P0L0 LINC01126-201ENST00000623515 1646 ntBASIC17.25■□□□□ 0.35
VAPAQ9P0L0 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VAPAQ9P0L0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
VAPAQ9P0L0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VAPAQ9P0L0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VAPAQ9P0L0 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VAPAQ9P0L0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VAPAQ9P0L0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VAPAQ9P0L0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
VAPAQ9P0L0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VAPAQ9P0L0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VAPAQ9P0L0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.25■□□□□ 0.35
VAPAQ9P0L0 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.25■□□□□ 0.35
VAPAQ9P0L0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VAPAQ9P0L0 AC009053.2-201ENST00000563701 2365 ntBASIC17.25■□□□□ 0.35
VAPAQ9P0L0 AC141586.5-201ENST00000624546 2050 ntBASIC17.25■□□□□ 0.35
VAPAQ9P0L0 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VAPAQ9P0L0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VAPAQ9P0L0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VAPAQ9P0L0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.25■□□□□ 0.35
VAPAQ9P0L0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
VAPAQ9P0L0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
VAPAQ9P0L0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.24■□□□□ 0.35
VAPAQ9P0L0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
VAPAQ9P0L0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VAPAQ9P0L0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
VAPAQ9P0L0 HOXB1-202ENST00000577092 1414 ntBASIC17.24■□□□□ 0.35
VAPAQ9P0L0 AL135905.2-201ENST00000584934 1404 ntBASIC17.24■□□□□ 0.35
VAPAQ9P0L0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
VAPAQ9P0L0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
VAPAQ9P0L0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VAPAQ9P0L0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
VAPAQ9P0L0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VAPAQ9P0L0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.24■□□□□ 0.35
VAPAQ9P0L0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VAPAQ9P0L0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.24■□□□□ 0.35
VAPAQ9P0L0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.24■□□□□ 0.35
VAPAQ9P0L0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VAPAQ9P0L0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
VAPAQ9P0L0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VAPAQ9P0L0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VAPAQ9P0L0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VAPAQ9P0L0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
VAPAQ9P0L0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms