Protein–RNA interactions for Protein: Q9NVH0

EXD2, Exonuclease 3'-5' domain-containing protein 2, humanhuman

Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD2Q9NVH0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.34■□□□□ 0.37
EXD2Q9NVH0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EXD2Q9NVH0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
EXD2Q9NVH0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
EXD2Q9NVH0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EXD2Q9NVH0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
EXD2Q9NVH0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
EXD2Q9NVH0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
EXD2Q9NVH0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.33■□□□□ 0.37
EXD2Q9NVH0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
EXD2Q9NVH0 AC134043.2-201ENST00000624206 2238 ntBASIC17.33■□□□□ 0.37
EXD2Q9NVH0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
EXD2Q9NVH0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
EXD2Q9NVH0 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
EXD2Q9NVH0 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.33■□□□□ 0.37
EXD2Q9NVH0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
EXD2Q9NVH0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.33■□□□□ 0.36
EXD2Q9NVH0 UNC93B2-201ENST00000285383 730 ntBASIC17.33■□□□□ 0.36
EXD2Q9NVH0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.33■□□□□ 0.36
EXD2Q9NVH0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.33■□□□□ 0.36
EXD2Q9NVH0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.33■□□□□ 0.36
EXD2Q9NVH0 AL023284.2-201ENST00000405850 579 ntBASIC17.33■□□□□ 0.36
EXD2Q9NVH0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.33■□□□□ 0.36
EXD2Q9NVH0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EXD2Q9NVH0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.33■□□□□ 0.36
EXD2Q9NVH0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.33■□□□□ 0.36
EXD2Q9NVH0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
EXD2Q9NVH0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.33■□□□□ 0.36
EXD2Q9NVH0 AP005242.2-201ENST00000580065 1175 ntBASIC17.33■□□□□ 0.36
EXD2Q9NVH0 MIR4785-201ENST00000585005 73 ntBASIC17.33■□□□□ 0.36
EXD2Q9NVH0 AC008622.2-201ENST00000617006 1229 ntBASIC17.33■□□□□ 0.36
EXD2Q9NVH0 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.33■□□□□ 0.36
EXD2Q9NVH0 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
EXD2Q9NVH0 AC009053.2-201ENST00000563701 2365 ntBASIC17.33■□□□□ 0.36
EXD2Q9NVH0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
EXD2Q9NVH0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
EXD2Q9NVH0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.33■□□□□ 0.36
EXD2Q9NVH0 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
EXD2Q9NVH0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
EXD2Q9NVH0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
EXD2Q9NVH0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EXD2Q9NVH0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EXD2Q9NVH0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EXD2Q9NVH0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
EXD2Q9NVH0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EXD2Q9NVH0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EXD2Q9NVH0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.32■□□□□ 0.36
EXD2Q9NVH0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EXD2Q9NVH0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
EXD2Q9NVH0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.32■□□□□ 0.36
EXD2Q9NVH0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
EXD2Q9NVH0 PKD1P1-201ENST00000458669 6805 ntBASIC17.32■□□□□ 0.36
EXD2Q9NVH0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.32■□□□□ 0.36
EXD2Q9NVH0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EXD2Q9NVH0 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EXD2Q9NVH0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.32■□□□□ 0.36
EXD2Q9NVH0 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
EXD2Q9NVH0 PCDHA12-202ENST00000613593 2588 ntBASIC17.32■□□□□ 0.36
EXD2Q9NVH0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EXD2Q9NVH0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.32■□□□□ 0.36
EXD2Q9NVH0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
EXD2Q9NVH0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EXD2Q9NVH0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.32■□□□□ 0.36
EXD2Q9NVH0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.32■□□□□ 0.36
EXD2Q9NVH0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.32■□□□□ 0.36
EXD2Q9NVH0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
EXD2Q9NVH0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.32■□□□□ 0.36
EXD2Q9NVH0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EXD2Q9NVH0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.32■□□□□ 0.36
EXD2Q9NVH0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
EXD2Q9NVH0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EXD2Q9NVH0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
EXD2Q9NVH0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EXD2Q9NVH0 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
EXD2Q9NVH0 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EXD2Q9NVH0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
EXD2Q9NVH0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EXD2Q9NVH0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
EXD2Q9NVH0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
EXD2Q9NVH0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EXD2Q9NVH0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.31■□□□□ 0.36
EXD2Q9NVH0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
EXD2Q9NVH0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
EXD2Q9NVH0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.31■□□□□ 0.36
EXD2Q9NVH0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EXD2Q9NVH0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EXD2Q9NVH0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EXD2Q9NVH0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EXD2Q9NVH0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EXD2Q9NVH0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
EXD2Q9NVH0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
EXD2Q9NVH0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EXD2Q9NVH0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.31■□□□□ 0.36
EXD2Q9NVH0 MIR564-202ENST00000385049 94 ntBASIC17.31■□□□□ 0.36
EXD2Q9NVH0 AP000593.1-201ENST00000393668 712 ntBASIC17.31■□□□□ 0.36
EXD2Q9NVH0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
EXD2Q9NVH0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.31■□□□□ 0.36
EXD2Q9NVH0 KRT18P41-201ENST00000518924 1277 ntBASIC17.31■□□□□ 0.36
EXD2Q9NVH0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.31■□□□□ 0.36
EXD2Q9NVH0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms