Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ABCF3Q9NUQ8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.59■□□□□ 0.57
ABCF3Q9NUQ8 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ABCF3Q9NUQ8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ABCF3Q9NUQ8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ABCF3Q9NUQ8 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ABCF3Q9NUQ8 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
ABCF3Q9NUQ8 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.59■□□□□ 0.57
ABCF3Q9NUQ8 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
ABCF3Q9NUQ8 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
ABCF3Q9NUQ8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
ABCF3Q9NUQ8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.58■□□□□ 0.57
ABCF3Q9NUQ8 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ABCF3Q9NUQ8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
ABCF3Q9NUQ8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ABCF3Q9NUQ8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ABCF3Q9NUQ8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ABCF3Q9NUQ8 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.58■□□□□ 0.57
ABCF3Q9NUQ8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
ABCF3Q9NUQ8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ABCF3Q9NUQ8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
ABCF3Q9NUQ8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ABCF3Q9NUQ8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
ABCF3Q9NUQ8 AC093827.2-201ENST00000512654 315 ntBASIC18.58■□□□□ 0.56
ABCF3Q9NUQ8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.58■□□□□ 0.56
ABCF3Q9NUQ8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ABCF3Q9NUQ8 AC233702.5-201ENST00000584107 538 ntBASIC18.58■□□□□ 0.56
ABCF3Q9NUQ8 AP001412.1-201ENST00000608405 714 ntBASIC18.58■□□□□ 0.56
ABCF3Q9NUQ8 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.58■□□□□ 0.56
ABCF3Q9NUQ8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ABCF3Q9NUQ8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.58■□□□□ 0.56
ABCF3Q9NUQ8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.58■□□□□ 0.56
ABCF3Q9NUQ8 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.58■□□□□ 0.56
ABCF3Q9NUQ8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.58■□□□□ 0.56
ABCF3Q9NUQ8 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.58■□□□□ 0.56
ABCF3Q9NUQ8 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ABCF3Q9NUQ8 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ABCF3Q9NUQ8 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.58■□□□□ 0.56
ABCF3Q9NUQ8 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
ABCF3Q9NUQ8 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ABCF3Q9NUQ8 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.58■□□□□ 0.56
ABCF3Q9NUQ8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ABCF3Q9NUQ8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ABCF3Q9NUQ8 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ABCF3Q9NUQ8 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ABCF3Q9NUQ8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ABCF3Q9NUQ8 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ABCF3Q9NUQ8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ABCF3Q9NUQ8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ABCF3Q9NUQ8 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.57■□□□□ 0.56
ABCF3Q9NUQ8 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ABCF3Q9NUQ8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ABCF3Q9NUQ8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ABCF3Q9NUQ8 AC012618.2-201ENST00000428058 849 ntBASIC18.57■□□□□ 0.56
ABCF3Q9NUQ8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.57■□□□□ 0.56
ABCF3Q9NUQ8 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.57■□□□□ 0.56
ABCF3Q9NUQ8 SNORA78-201ENST00000459373 127 ntBASIC18.57■□□□□ 0.56
ABCF3Q9NUQ8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ABCF3Q9NUQ8 Z85996.1-201ENST00000494644 937 ntBASIC18.57■□□□□ 0.56
ABCF3Q9NUQ8 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ABCF3Q9NUQ8 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.57■□□□□ 0.56
ABCF3Q9NUQ8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.57■□□□□ 0.56
ABCF3Q9NUQ8 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ABCF3Q9NUQ8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ABCF3Q9NUQ8 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
ABCF3Q9NUQ8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ABCF3Q9NUQ8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ABCF3Q9NUQ8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ABCF3Q9NUQ8 AL139384.1-201ENST00000612143 3047 ntBASIC18.57■□□□□ 0.56
ABCF3Q9NUQ8 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.57■□□□□ 0.56
ABCF3Q9NUQ8 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ABCF3Q9NUQ8 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ABCF3Q9NUQ8 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ABCF3Q9NUQ8 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ABCF3Q9NUQ8 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ABCF3Q9NUQ8 RCC2P6-201ENST00000526625 1557 ntBASIC18.56■□□□□ 0.56
ABCF3Q9NUQ8 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
ABCF3Q9NUQ8 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ABCF3Q9NUQ8 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
ABCF3Q9NUQ8 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ABCF3Q9NUQ8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ABCF3Q9NUQ8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ABCF3Q9NUQ8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.56■□□□□ 0.56
ABCF3Q9NUQ8 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ABCF3Q9NUQ8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ABCF3Q9NUQ8 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
ABCF3Q9NUQ8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
ABCF3Q9NUQ8 AL355355.2-201ENST00000442321 338 ntBASIC18.56■□□□□ 0.56
ABCF3Q9NUQ8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
ABCF3Q9NUQ8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.56■□□□□ 0.56
ABCF3Q9NUQ8 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.56■□□□□ 0.56
ABCF3Q9NUQ8 AC011298.2-201ENST00000617989 482 ntBASIC18.56■□□□□ 0.56
ABCF3Q9NUQ8 AC066615.1-201ENST00000640911 628 ntBASIC18.56■□□□□ 0.56
ABCF3Q9NUQ8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.56■□□□□ 0.56
ABCF3Q9NUQ8 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ABCF3Q9NUQ8 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ABCF3Q9NUQ8 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
ABCF3Q9NUQ8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.56■□□□□ 0.56
ABCF3Q9NUQ8 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
ABCF3Q9NUQ8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms