Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 AC092338.2-201ENST00000568827 1415 ntBASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 AP000525.1-201ENST00000608286 694 ntBASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRTM1Q9HBL6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 BX088651.1-201ENST00000540551 451 ntBASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 FITM1-202ENST00000559294 800 ntBASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.56■□□□□ 0.4
LRTM1Q9HBL6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 AL390955.1-201ENST00000428694 934 ntBASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 AC009065.1-201ENST00000564055 1225 ntBASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 AC116562.4-202ENST00000641738 218 ntBASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms