Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 AL137013.1-201ENST00000432946 1228 ntBASIC17.58■□□□□ 0.4
LIN28AQ9H9Z2 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.58■□□□□ 0.4
LIN28AQ9H9Z2 FAM210CP-201ENST00000445714 574 ntBASIC17.58■□□□□ 0.4
LIN28AQ9H9Z2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.58■□□□□ 0.4
LIN28AQ9H9Z2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LIN28AQ9H9Z2 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LIN28AQ9H9Z2 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LIN28AQ9H9Z2 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.58■□□□□ 0.4
LIN28AQ9H9Z2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LIN28AQ9H9Z2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.58■□□□□ 0.4
LIN28AQ9H9Z2 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.58■□□□□ 0.4
LIN28AQ9H9Z2 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
LIN28AQ9H9Z2 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LIN28AQ9H9Z2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LIN28AQ9H9Z2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LIN28AQ9H9Z2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LIN28AQ9H9Z2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.58■□□□□ 0.4
LIN28AQ9H9Z2 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
LIN28AQ9H9Z2 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.58■□□□□ 0.4
LIN28AQ9H9Z2 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
LIN28AQ9H9Z2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 AC126763.1-201ENST00000552015 2118 ntBASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 AC092338.2-201ENST00000568827 1415 ntBASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 IRX1P1-201ENST00000438849 1838 ntBASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 AC141586.3-201ENST00000562166 1838 ntBASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 AC113347.1-201ENST00000413321 391 ntBASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 AP003041.3-201ENST00000527151 707 ntBASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 AL353719.1-201ENST00000566847 864 ntBASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.57■□□□□ 0.4
LIN28AQ9H9Z2 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIN28AQ9H9Z2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.56■□□□□ 0.4
LIN28AQ9H9Z2 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LIN28AQ9H9Z2 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.56■□□□□ 0.4
LIN28AQ9H9Z2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIN28AQ9H9Z2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIN28AQ9H9Z2 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LIN28AQ9H9Z2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIN28AQ9H9Z2 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIN28AQ9H9Z2 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIN28AQ9H9Z2 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIN28AQ9H9Z2 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIN28AQ9H9Z2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.56■□□□□ 0.4
LIN28AQ9H9Z2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIN28AQ9H9Z2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LIN28AQ9H9Z2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIN28AQ9H9Z2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.56■□□□□ 0.4
LIN28AQ9H9Z2 TERF1P1-201ENST00000311003 1181 ntBASIC17.56■□□□□ 0.4
LIN28AQ9H9Z2 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.56■□□□□ 0.4
LIN28AQ9H9Z2 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.56■□□□□ 0.4
LIN28AQ9H9Z2 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.56■□□□□ 0.4
LIN28AQ9H9Z2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
LIN28AQ9H9Z2 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LIN28AQ9H9Z2 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LIN28AQ9H9Z2 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LIN28AQ9H9Z2 AC008622.2-201ENST00000617006 1229 ntBASIC17.56■□□□□ 0.4
LIN28AQ9H9Z2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
LIN28AQ9H9Z2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.56■□□□□ 0.4
LIN28AQ9H9Z2 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.56■□□□□ 0.4
LIN28AQ9H9Z2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.56■□□□□ 0.4
LIN28AQ9H9Z2 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 TMPOP1-202ENST00000424642 1267 ntBASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 LIN28AP1-201ENST00000429574 405 ntBASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.55■□□□□ 0.4
LIN28AQ9H9Z2 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms