Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TUBB1Q9H4B7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TUBB1Q9H4B7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.58■□□□□ 0.41
TUBB1Q9H4B7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.58■□□□□ 0.41
TUBB1Q9H4B7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TUBB1Q9H4B7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TUBB1Q9H4B7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
TUBB1Q9H4B7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TUBB1Q9H4B7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.58■□□□□ 0.41
TUBB1Q9H4B7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TUBB1Q9H4B7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TUBB1Q9H4B7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TUBB1Q9H4B7 AL390955.1-201ENST00000428694 934 ntBASIC17.58■□□□□ 0.4
TUBB1Q9H4B7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TUBB1Q9H4B7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.58■□□□□ 0.4
TUBB1Q9H4B7 AC104390.1-201ENST00000555663 520 ntBASIC17.58■□□□□ 0.4
TUBB1Q9H4B7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.58■□□□□ 0.4
TUBB1Q9H4B7 AP000525.1-201ENST00000608286 694 ntBASIC17.58■□□□□ 0.4
TUBB1Q9H4B7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TUBB1Q9H4B7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TUBB1Q9H4B7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.58■□□□□ 0.4
TUBB1Q9H4B7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TUBB1Q9H4B7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.58■□□□□ 0.4
TUBB1Q9H4B7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TUBB1Q9H4B7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.58■□□□□ 0.4
TUBB1Q9H4B7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TUBB1Q9H4B7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.57■□□□□ 0.4
TUBB1Q9H4B7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TUBB1Q9H4B7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
TUBB1Q9H4B7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBB1Q9H4B7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBB1Q9H4B7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.57■□□□□ 0.4
TUBB1Q9H4B7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.57■□□□□ 0.4
TUBB1Q9H4B7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBB1Q9H4B7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBB1Q9H4B7 UNC93B2-201ENST00000285383 730 ntBASIC17.57■□□□□ 0.4
TUBB1Q9H4B7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.57■□□□□ 0.4
TUBB1Q9H4B7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBB1Q9H4B7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TUBB1Q9H4B7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.57■□□□□ 0.4
TUBB1Q9H4B7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.57■□□□□ 0.4
TUBB1Q9H4B7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.57■□□□□ 0.4
TUBB1Q9H4B7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.57■□□□□ 0.4
TUBB1Q9H4B7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.57■□□□□ 0.4
TUBB1Q9H4B7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.57■□□□□ 0.4
TUBB1Q9H4B7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TUBB1Q9H4B7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.57■□□□□ 0.4
TUBB1Q9H4B7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBB1Q9H4B7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBB1Q9H4B7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBB1Q9H4B7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TUBB1Q9H4B7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TUBB1Q9H4B7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBB1Q9H4B7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TUBB1Q9H4B7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TUBB1Q9H4B7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.56■□□□□ 0.4
TUBB1Q9H4B7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBB1Q9H4B7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBB1Q9H4B7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBB1Q9H4B7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
TUBB1Q9H4B7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
TUBB1Q9H4B7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.56■□□□□ 0.4
TUBB1Q9H4B7 AC108860.2-201ENST00000562760 2183 ntBASIC17.56■□□□□ 0.4
TUBB1Q9H4B7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.56■□□□□ 0.4
TUBB1Q9H4B7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TUBB1Q9H4B7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TUBB1Q9H4B7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBB1Q9H4B7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TUBB1Q9H4B7 TSPY7P-201ENST00000431358 1114 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms