Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VPS11Q9H270 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VPS11Q9H270 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.38■□□□□ 0.53
VPS11Q9H270 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS11Q9H270 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.38■□□□□ 0.53
VPS11Q9H270 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VPS11Q9H270 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
VPS11Q9H270 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS11Q9H270 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VPS11Q9H270 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS11Q9H270 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS11Q9H270 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
VPS11Q9H270 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.38■□□□□ 0.53
VPS11Q9H270 RARRES2P10-201ENST00000564312 460 ntBASIC18.38■□□□□ 0.53
VPS11Q9H270 MIR4651-201ENST00000582622 73 ntBASIC18.38■□□□□ 0.53
VPS11Q9H270 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
VPS11Q9H270 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.38■□□□□ 0.53
VPS11Q9H270 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS11Q9H270 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.38■□□□□ 0.53
VPS11Q9H270 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS11Q9H270 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS11Q9H270 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.38■□□□□ 0.53
VPS11Q9H270 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.38■□□□□ 0.53
VPS11Q9H270 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
VPS11Q9H270 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS11Q9H270 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS11Q9H270 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS11Q9H270 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
VPS11Q9H270 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
VPS11Q9H270 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS11Q9H270 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.37■□□□□ 0.53
VPS11Q9H270 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.37■□□□□ 0.53
VPS11Q9H270 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS11Q9H270 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS11Q9H270 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
VPS11Q9H270 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS11Q9H270 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VPS11Q9H270 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS11Q9H270 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VPS11Q9H270 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VPS11Q9H270 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VPS11Q9H270 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS11Q9H270 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
VPS11Q9H270 KRT18P41-201ENST00000518924 1277 ntBASIC18.37■□□□□ 0.53
VPS11Q9H270 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.37■□□□□ 0.53
VPS11Q9H270 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.37■□□□□ 0.53
VPS11Q9H270 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.37■□□□□ 0.53
VPS11Q9H270 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS11Q9H270 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.37■□□□□ 0.53
VPS11Q9H270 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
VPS11Q9H270 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.37■□□□□ 0.53
VPS11Q9H270 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
VPS11Q9H270 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
VPS11Q9H270 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS11Q9H270 AC099343.3-201ENST00000605834 2503 ntBASIC18.37■□□□□ 0.53
VPS11Q9H270 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS11Q9H270 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
VPS11Q9H270 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS11Q9H270 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS11Q9H270 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS11Q9H270 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
VPS11Q9H270 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.36■□□□□ 0.53
VPS11Q9H270 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
VPS11Q9H270 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
VPS11Q9H270 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS11Q9H270 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.36■□□□□ 0.53
VPS11Q9H270 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.36■□□□□ 0.53
VPS11Q9H270 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS11Q9H270 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
VPS11Q9H270 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
VPS11Q9H270 CD99P1-205ENST00000527459 561 ntBASIC18.36■□□□□ 0.53
VPS11Q9H270 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.36■□□□□ 0.53
VPS11Q9H270 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VPS11Q9H270 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.36■□□□□ 0.53
VPS11Q9H270 FSCN1P1-201ENST00000568912 1481 ntBASIC18.36■□□□□ 0.53
VPS11Q9H270 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.36■□□□□ 0.53
VPS11Q9H270 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
VPS11Q9H270 AP000692.2-201ENST00000608391 879 ntBASIC18.36■□□□□ 0.53
VPS11Q9H270 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS11Q9H270 FAM197Y4-202ENST00000622692 608 ntBASIC18.36■□□□□ 0.53
VPS11Q9H270 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VPS11Q9H270 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS11Q9H270 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS11Q9H270 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS11Q9H270 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS11Q9H270 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.35■□□□□ 0.53
VPS11Q9H270 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS11Q9H270 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS11Q9H270 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS11Q9H270 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS11Q9H270 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS11Q9H270 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
VPS11Q9H270 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS11Q9H270 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS11Q9H270 MIR564-202ENST00000385049 94 ntBASIC18.35■□□□□ 0.53
VPS11Q9H270 AL023284.2-201ENST00000405850 579 ntBASIC18.35■□□□□ 0.53
VPS11Q9H270 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS11Q9H270 FAM197Y1-201ENST00000421178 764 ntBASIC18.35■□□□□ 0.53
VPS11Q9H270 MCCD1P1-208ENST00000445732 328 ntBASIC18.35■□□□□ 0.53
VPS11Q9H270 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms