Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLIRPQ9GZT3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.06■□□□□ 0.16
SLIRPQ9GZT3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.06■□□□□ 0.16
SLIRPQ9GZT3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.06■□□□□ 0.16
SLIRPQ9GZT3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SLIRPQ9GZT3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLIRPQ9GZT3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLIRPQ9GZT3 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.06■□□□□ 0.16
SLIRPQ9GZT3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.06■□□□□ 0.16
SLIRPQ9GZT3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.06■□□□□ 0.16
SLIRPQ9GZT3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLIRPQ9GZT3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.06■□□□□ 0.16
SLIRPQ9GZT3 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.06■□□□□ 0.16
SLIRPQ9GZT3 AL160286.2-201ENST00000567150 934 ntBASIC16.06■□□□□ 0.16
SLIRPQ9GZT3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLIRPQ9GZT3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.06■□□□□ 0.16
SLIRPQ9GZT3 AC069236.1-201ENST00000604339 616 ntBASIC16.06■□□□□ 0.16
SLIRPQ9GZT3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLIRPQ9GZT3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
SLIRPQ9GZT3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLIRPQ9GZT3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLIRPQ9GZT3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLIRPQ9GZT3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.06■□□□□ 0.16
SLIRPQ9GZT3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.06■□□□□ 0.16
SLIRPQ9GZT3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SLIRPQ9GZT3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLIRPQ9GZT3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.06■□□□□ 0.16
SLIRPQ9GZT3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLIRPQ9GZT3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLIRPQ9GZT3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.06■□□□□ 0.16
SLIRPQ9GZT3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 KRT8P3-201ENST00000519669 1449 ntBASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 AC005181.1-201ENST00000604782 1256 ntBASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 AL121906.2-201ENST00000621597 723 ntBASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.05■□□□□ 0.16
SLIRPQ9GZT3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SLIRPQ9GZT3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
SLIRPQ9GZT3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLIRPQ9GZT3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms