Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 CICP6-201ENST00000457191 2729 ntBASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC13.8□□□□□ -0.2
SSBP4Q9BWG4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 AL118508.1-201ENST00000613502 2345 ntBASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 DUSP5P2-201ENST00000426873 1033 ntBASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 TSPY23P-201ENST00000440136 739 ntBASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 SERPINA7P1-201ENST00000443077 631 ntBASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 Z99916.3-201ENST00000623422 1080 ntBASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 LINC01126-201ENST00000623515 1646 ntBASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC13.79□□□□□ -0.2
SSBP4Q9BWG4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 MIPEPP3-201ENST00000412105 444 ntBASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 AC091874.3-201ENST00000512672 1195 ntBASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSBP4Q9BWG4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms