Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.26■□□□□ 0.51
CPNE1Q99829 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE1Q99829 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CPNE1Q99829 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
CPNE1Q99829 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE1Q99829 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CPNE1Q99829 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE1Q99829 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CPNE1Q99829 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE1Q99829 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CPNE1Q99829 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CPNE1Q99829 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.26■□□□□ 0.51
CPNE1Q99829 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.26■□□□□ 0.51
CPNE1Q99829 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CPNE1Q99829 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.26■□□□□ 0.51
CPNE1Q99829 UNC93B2-201ENST00000285383 730 ntBASIC18.26■□□□□ 0.51
CPNE1Q99829 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE1Q99829 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.26■□□□□ 0.51
CPNE1Q99829 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.26■□□□□ 0.51
CPNE1Q99829 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.26■□□□□ 0.51
CPNE1Q99829 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE1Q99829 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.26■□□□□ 0.51
CPNE1Q99829 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE1Q99829 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE1Q99829 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
CPNE1Q99829 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE1Q99829 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE1Q99829 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CPNE1Q99829 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE1Q99829 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.26■□□□□ 0.51
CPNE1Q99829 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE1Q99829 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CPNE1Q99829 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE1Q99829 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE1Q99829 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CPNE1Q99829 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE1Q99829 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE1Q99829 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE1Q99829 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE1Q99829 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE1Q99829 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CPNE1Q99829 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE1Q99829 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE1Q99829 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CPNE1Q99829 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE1Q99829 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE1Q99829 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.25■□□□□ 0.51
CPNE1Q99829 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.25■□□□□ 0.51
CPNE1Q99829 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.25■□□□□ 0.51
CPNE1Q99829 MIR3180-4-201ENST00000582223 153 ntBASIC18.25■□□□□ 0.51
CPNE1Q99829 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CPNE1Q99829 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE1Q99829 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.25■□□□□ 0.51
CPNE1Q99829 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE1Q99829 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE1Q99829 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CPNE1Q99829 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CPNE1Q99829 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE1Q99829 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE1Q99829 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CPNE1Q99829 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE1Q99829 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CPNE1Q99829 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE1Q99829 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.24■□□□□ 0.51
CPNE1Q99829 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CPNE1Q99829 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE1Q99829 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.24■□□□□ 0.51
CPNE1Q99829 KRT18P55-202ENST00000578578 1546 ntBASIC18.24■□□□□ 0.51
CPNE1Q99829 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE1Q99829 LINC01126-201ENST00000623515 1646 ntBASIC18.24■□□□□ 0.51
CPNE1Q99829 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.24■□□□□ 0.51
CPNE1Q99829 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE1Q99829 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.24■□□□□ 0.51
CPNE1Q99829 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.24■□□□□ 0.51
CPNE1Q99829 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE1Q99829 CCR12P-201ENST00000446203 998 ntBASIC18.24■□□□□ 0.51
CPNE1Q99829 RBM17P1-201ENST00000453646 1190 ntBASIC18.24■□□□□ 0.51
CPNE1Q99829 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.24■□□□□ 0.51
CPNE1Q99829 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.24■□□□□ 0.51
CPNE1Q99829 Z99916.2-201ENST00000604037 246 ntBASIC18.24■□□□□ 0.51
CPNE1Q99829 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.24■□□□□ 0.51
CPNE1Q99829 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE1Q99829 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE1Q99829 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE1Q99829 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.24■□□□□ 0.51
CPNE1Q99829 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE1Q99829 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE1Q99829 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE1Q99829 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE1Q99829 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.24■□□□□ 0.51
CPNE1Q99829 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CPNE1Q99829 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE1Q99829 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE1Q99829 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.24■□□□□ 0.51
CPNE1Q99829 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CPNE1Q99829 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE1Q99829 AC092338.2-201ENST00000568827 1415 ntBASIC18.23■□□□□ 0.51
CPNE1Q99829 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE1Q99829 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.23■□□□□ 0.51
CPNE1Q99829 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms