Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
LYSTQ99698 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
LYSTQ99698 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.58□□□□□ -0.4
LYSTQ99698 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.58□□□□□ -0.4
LYSTQ99698 Z92544.3-201ENST00000624747 417 ntBASIC12.58□□□□□ -0.4
LYSTQ99698 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LYSTQ99698 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LYSTQ99698 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC12.58□□□□□ -0.4
LYSTQ99698 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LYSTQ99698 KRT8P32-201ENST00000512863 1461 ntBASIC12.58□□□□□ -0.4
LYSTQ99698 AC002310.6-201ENST00000624451 1377 ntBASIC12.58□□□□□ -0.4
LYSTQ99698 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
LYSTQ99698 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.58□□□□□ -0.4
LYSTQ99698 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LYSTQ99698 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LYSTQ99698 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
LYSTQ99698 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
LYSTQ99698 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LYSTQ99698 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC12.57□□□□□ -0.4
LYSTQ99698 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LYSTQ99698 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LYSTQ99698 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LYSTQ99698 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LYSTQ99698 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC12.57□□□□□ -0.4
LYSTQ99698 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LYSTQ99698 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LYSTQ99698 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LYSTQ99698 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
LYSTQ99698 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
LYSTQ99698 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LYSTQ99698 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LYSTQ99698 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LYSTQ99698 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LYSTQ99698 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
LYSTQ99698 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LYSTQ99698 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC12.57□□□□□ -0.4
LYSTQ99698 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LYSTQ99698 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LYSTQ99698 GSAP-205ENST00000430584 600 ntTSL 5 BASIC12.57□□□□□ -0.4
LYSTQ99698 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.57□□□□□ -0.4
LYSTQ99698 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC12.57□□□□□ -0.4
LYSTQ99698 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC12.57□□□□□ -0.4
LYSTQ99698 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC12.57□□□□□ -0.4
LYSTQ99698 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC12.57□□□□□ -0.4
LYSTQ99698 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC12.57□□□□□ -0.4
LYSTQ99698 KRT89P-201ENST00000620027 1478 ntBASIC12.57□□□□□ -0.4
LYSTQ99698 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC12.57□□□□□ -0.4
LYSTQ99698 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC12.57□□□□□ -0.4
LYSTQ99698 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.57□□□□□ -0.4
LYSTQ99698 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LYSTQ99698 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC12.57□□□□□ -0.4
LYSTQ99698 RCN1P2-201ENST00000398357 915 ntBASIC12.57□□□□□ -0.4
LYSTQ99698 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LYSTQ99698 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.57□□□□□ -0.4
LYSTQ99698 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC12.57□□□□□ -0.4
LYSTQ99698 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LYSTQ99698 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.57□□□□□ -0.4
LYSTQ99698 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC12.57□□□□□ -0.4
LYSTQ99698 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC12.57□□□□□ -0.4
LYSTQ99698 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LYSTQ99698 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC12.56□□□□□ -0.4
LYSTQ99698 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LYSTQ99698 AL356309.3-201ENST00000624132 1934 ntBASIC12.56□□□□□ -0.4
LYSTQ99698 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LYSTQ99698 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LYSTQ99698 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
LYSTQ99698 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LYSTQ99698 ELP6-205ENST00000439305 880 ntTSL 2 BASIC12.56□□□□□ -0.4
LYSTQ99698 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC12.56□□□□□ -0.4
LYSTQ99698 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC12.56□□□□□ -0.4
LYSTQ99698 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC12.56□□□□□ -0.4
LYSTQ99698 TP73-AS1-210ENST00000637775 1455 ntBASIC12.56□□□□□ -0.4
LYSTQ99698 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
LYSTQ99698 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LYSTQ99698 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LYSTQ99698 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC12.56□□□□□ -0.4
LYSTQ99698 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
LYSTQ99698 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LYSTQ99698 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
LYSTQ99698 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LYSTQ99698 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LYSTQ99698 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC12.56□□□□□ -0.4
LYSTQ99698 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC12.56□□□□□ -0.4
LYSTQ99698 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LYSTQ99698 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC12.56□□□□□ -0.4
LYSTQ99698 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.56□□□□□ -0.4
LYSTQ99698 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LYSTQ99698 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
LYSTQ99698 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.56□□□□□ -0.4
LYSTQ99698 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
LYSTQ99698 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC12.56□□□□□ -0.4
LYSTQ99698 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
LYSTQ99698 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LYSTQ99698 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC12.56□□□□□ -0.4
LYSTQ99698 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LYSTQ99698 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LYSTQ99698 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
LYSTQ99698 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LYSTQ99698 PDPK2P-202ENST00000562415 1191 ntBASIC12.56□□□□□ -0.4
LYSTQ99698 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms