Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNX18Q96RF0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.65■□□□□ 0.26
SNX18Q96RF0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SNX18Q96RF0 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX18Q96RF0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SNX18Q96RF0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.65■□□□□ 0.26
SNX18Q96RF0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.65■□□□□ 0.26
SNX18Q96RF0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.65■□□□□ 0.26
SNX18Q96RF0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNX18Q96RF0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.65■□□□□ 0.26
SNX18Q96RF0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.65■□□□□ 0.26
SNX18Q96RF0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX18Q96RF0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SNX18Q96RF0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SNX18Q96RF0 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX18Q96RF0 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.65■□□□□ 0.26
SNX18Q96RF0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNX18Q96RF0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.65■□□□□ 0.26
SNX18Q96RF0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SNX18Q96RF0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.65■□□□□ 0.26
SNX18Q96RF0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.65■□□□□ 0.26
SNX18Q96RF0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNX18Q96RF0 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX18Q96RF0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.65■□□□□ 0.26
SNX18Q96RF0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNX18Q96RF0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
SNX18Q96RF0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SNX18Q96RF0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.64■□□□□ 0.26
SNX18Q96RF0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
SNX18Q96RF0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SNX18Q96RF0 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SNX18Q96RF0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX18Q96RF0 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX18Q96RF0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.64■□□□□ 0.25
SNX18Q96RF0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX18Q96RF0 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX18Q96RF0 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX18Q96RF0 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX18Q96RF0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX18Q96RF0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SNX18Q96RF0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SNX18Q96RF0 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNX18Q96RF0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNX18Q96RF0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNX18Q96RF0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNX18Q96RF0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.64■□□□□ 0.25
SNX18Q96RF0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.64■□□□□ 0.25
SNX18Q96RF0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.64■□□□□ 0.25
SNX18Q96RF0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX18Q96RF0 LINC01023-201ENST00000606054 436 ntBASIC16.64■□□□□ 0.25
SNX18Q96RF0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.64■□□□□ 0.25
SNX18Q96RF0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.64■□□□□ 0.25
SNX18Q96RF0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX18Q96RF0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNX18Q96RF0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNX18Q96RF0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
SNX18Q96RF0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX18Q96RF0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SNX18Q96RF0 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX18Q96RF0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX18Q96RF0 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.64■□□□□ 0.25
SNX18Q96RF0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.64■□□□□ 0.25
SNX18Q96RF0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SNX18Q96RF0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
SNX18Q96RF0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX18Q96RF0 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.64■□□□□ 0.25
SNX18Q96RF0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX18Q96RF0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SNX18Q96RF0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.63■□□□□ 0.25
SNX18Q96RF0 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX18Q96RF0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.63■□□□□ 0.25
SNX18Q96RF0 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX18Q96RF0 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
SNX18Q96RF0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.63■□□□□ 0.25
SNX18Q96RF0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SNX18Q96RF0 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.63■□□□□ 0.25
SNX18Q96RF0 CA15P1-201ENST00000481698 905 ntBASIC16.63■□□□□ 0.25
SNX18Q96RF0 AC116562.2-201ENST00000507042 360 ntBASIC16.63■□□□□ 0.25
SNX18Q96RF0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.63■□□□□ 0.25
SNX18Q96RF0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.63■□□□□ 0.25
SNX18Q96RF0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
SNX18Q96RF0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX18Q96RF0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX18Q96RF0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX18Q96RF0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX18Q96RF0 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SNX18Q96RF0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX18Q96RF0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SNX18Q96RF0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX18Q96RF0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNX18Q96RF0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX18Q96RF0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.62■□□□□ 0.25
SNX18Q96RF0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNX18Q96RF0 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNX18Q96RF0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX18Q96RF0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SNX18Q96RF0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SNX18Q96RF0 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX18Q96RF0 AP000593.1-201ENST00000393668 712 ntBASIC16.62■□□□□ 0.25
SNX18Q96RF0 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms