Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A4EQ96PG1 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.04■□□□□ 0.32
MS4A4EQ96PG1 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A4EQ96PG1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MS4A4EQ96PG1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
MS4A4EQ96PG1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A4EQ96PG1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A4EQ96PG1 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.04■□□□□ 0.32
MS4A4EQ96PG1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A4EQ96PG1 FLJ13224-201ENST00000313737 1514 ntBASIC17.04■□□□□ 0.32
MS4A4EQ96PG1 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
MS4A4EQ96PG1 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A4EQ96PG1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
MS4A4EQ96PG1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A4EQ96PG1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.04■□□□□ 0.32
MS4A4EQ96PG1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MS4A4EQ96PG1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.04■□□□□ 0.32
MS4A4EQ96PG1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.04■□□□□ 0.32
MS4A4EQ96PG1 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
MS4A4EQ96PG1 LINC01126-201ENST00000623515 1646 ntBASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 AC113347.1-201ENST00000413321 391 ntBASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 AC034232.1-201ENST00000506026 1064 ntBASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 AC010203.1-204ENST00000548782 407 ntBASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 AC008687.5-201ENST00000593746 558 ntBASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 AC012306.2-201ENST00000609350 630 ntBASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 AC097493.4-201ENST00000641197 219 ntBASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 AC018470.1-201ENST00000624790 3129 ntBASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 NOC2LP2-201ENST00000407594 1944 ntBASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 AC093010.1-201ENST00000473625 1624 ntBASIC17.03■□□□□ 0.32
MS4A4EQ96PG1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
MS4A4EQ96PG1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.02■□□□□ 0.32
MS4A4EQ96PG1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MS4A4EQ96PG1 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MS4A4EQ96PG1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.02■□□□□ 0.32
MS4A4EQ96PG1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.02■□□□□ 0.32
MS4A4EQ96PG1 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
MS4A4EQ96PG1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MS4A4EQ96PG1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MS4A4EQ96PG1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MS4A4EQ96PG1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MS4A4EQ96PG1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MS4A4EQ96PG1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MS4A4EQ96PG1 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.02■□□□□ 0.32
MS4A4EQ96PG1 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.02■□□□□ 0.32
MS4A4EQ96PG1 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.02■□□□□ 0.32
MS4A4EQ96PG1 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
MS4A4EQ96PG1 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
MS4A4EQ96PG1 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.02■□□□□ 0.32
MS4A4EQ96PG1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
MS4A4EQ96PG1 AC005363.2-201ENST00000618631 242 ntBASIC17.02■□□□□ 0.32
MS4A4EQ96PG1 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MS4A4EQ96PG1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.31
MS4A4EQ96PG1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MS4A4EQ96PG1 HTR7P1-202ENST00000624664 4411 ntBASIC17.02■□□□□ 0.31
MS4A4EQ96PG1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
MS4A4EQ96PG1 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
MS4A4EQ96PG1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
MS4A4EQ96PG1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
MS4A4EQ96PG1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
MS4A4EQ96PG1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
MS4A4EQ96PG1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MS4A4EQ96PG1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MS4A4EQ96PG1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MS4A4EQ96PG1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MS4A4EQ96PG1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.01■□□□□ 0.31
MS4A4EQ96PG1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MS4A4EQ96PG1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MS4A4EQ96PG1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
MS4A4EQ96PG1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MS4A4EQ96PG1 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MS4A4EQ96PG1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.01■□□□□ 0.31
MS4A4EQ96PG1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MS4A4EQ96PG1 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
MS4A4EQ96PG1 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MS4A4EQ96PG1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
MS4A4EQ96PG1 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MS4A4EQ96PG1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MS4A4EQ96PG1 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms