Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHDQ96IW2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SHDQ96IW2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.37■□□□□ 0.53
SHDQ96IW2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SHDQ96IW2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
SHDQ96IW2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHDQ96IW2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
SHDQ96IW2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SHDQ96IW2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHDQ96IW2 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHDQ96IW2 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SHDQ96IW2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SHDQ96IW2 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.36■□□□□ 0.53
SHDQ96IW2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.36■□□□□ 0.53
SHDQ96IW2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.36■□□□□ 0.53
SHDQ96IW2 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.36■□□□□ 0.53
SHDQ96IW2 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.36■□□□□ 0.53
SHDQ96IW2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.36■□□□□ 0.53
SHDQ96IW2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SHDQ96IW2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.36■□□□□ 0.53
SHDQ96IW2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.36■□□□□ 0.53
SHDQ96IW2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.36■□□□□ 0.53
SHDQ96IW2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.36■□□□□ 0.53
SHDQ96IW2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.36■□□□□ 0.53
SHDQ96IW2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.36■□□□□ 0.53
SHDQ96IW2 AP002414.3-201ENST00000589352 1468 ntBASIC18.36■□□□□ 0.53
SHDQ96IW2 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.36■□□□□ 0.53
SHDQ96IW2 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.36■□□□□ 0.53
SHDQ96IW2 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.36■□□□□ 0.53
SHDQ96IW2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.36■□□□□ 0.53
SHDQ96IW2 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SHDQ96IW2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.36■□□□□ 0.53
SHDQ96IW2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHDQ96IW2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.36■□□□□ 0.53
SHDQ96IW2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHDQ96IW2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.35■□□□□ 0.53
SHDQ96IW2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHDQ96IW2 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SHDQ96IW2 AL024508.2-201ENST00000607749 1894 ntBASIC18.35■□□□□ 0.53
SHDQ96IW2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SHDQ96IW2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.35■□□□□ 0.53
SHDQ96IW2 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.35■□□□□ 0.53
SHDQ96IW2 AC009947.1-201ENST00000444350 727 ntBASIC18.35■□□□□ 0.53
SHDQ96IW2 AP006288.1-201ENST00000446065 395 ntBASIC18.35■□□□□ 0.53
SHDQ96IW2 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.35■□□□□ 0.53
SHDQ96IW2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.35■□□□□ 0.53
SHDQ96IW2 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.35■□□□□ 0.53
SHDQ96IW2 AC005593.1-201ENST00000624894 515 ntBASIC18.35■□□□□ 0.53
SHDQ96IW2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHDQ96IW2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.35■□□□□ 0.53
SHDQ96IW2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SHDQ96IW2 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHDQ96IW2 LINC00602-201ENST00000629776 2065 ntBASIC18.35■□□□□ 0.53
SHDQ96IW2 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SHDQ96IW2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.35■□□□□ 0.53
SHDQ96IW2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHDQ96IW2 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.34■□□□□ 0.53
SHDQ96IW2 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SHDQ96IW2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.34■□□□□ 0.53
SHDQ96IW2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHDQ96IW2 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHDQ96IW2 KRT18P28-201ENST00000453838 1332 ntBASIC18.34■□□□□ 0.53
SHDQ96IW2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SHDQ96IW2 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SHDQ96IW2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHDQ96IW2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SHDQ96IW2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SHDQ96IW2 AC023274.1-201ENST00000418278 595 ntBASIC18.34■□□□□ 0.53
SHDQ96IW2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.34■□□□□ 0.53
SHDQ96IW2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
SHDQ96IW2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
SHDQ96IW2 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.34■□□□□ 0.53
SHDQ96IW2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.34■□□□□ 0.53
SHDQ96IW2 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.34■□□□□ 0.53
SHDQ96IW2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.34■□□□□ 0.53
SHDQ96IW2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHDQ96IW2 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SHDQ96IW2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SHDQ96IW2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHDQ96IW2 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.34■□□□□ 0.53
SHDQ96IW2 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SHDQ96IW2 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SHDQ96IW2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SHDQ96IW2 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.33■□□□□ 0.53
SHDQ96IW2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SHDQ96IW2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.33■□□□□ 0.53
SHDQ96IW2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.33■□□□□ 0.53
SHDQ96IW2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SHDQ96IW2 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SHDQ96IW2 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SHDQ96IW2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.33■□□□□ 0.52
SHDQ96IW2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.33■□□□□ 0.52
SHDQ96IW2 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SHDQ96IW2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SHDQ96IW2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.33■□□□□ 0.52
SHDQ96IW2 AC006557.2-201ENST00000592985 1240 ntBASIC18.33■□□□□ 0.52
SHDQ96IW2 AP000867.4-201ENST00000641616 219 ntBASIC18.33■□□□□ 0.52
SHDQ96IW2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SHDQ96IW2 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SHDQ96IW2 SDHAP2-201ENST00000455183 2001 ntBASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms