Protein–RNA interactions for Protein: Q96DX7

TRIM44, Tripartite motif-containing protein 44, humanhuman

Predicted RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44Q96DX7 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
TRIM44Q96DX7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
TRIM44Q96DX7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TRIM44Q96DX7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.69■□□□□ 0.9
TRIM44Q96DX7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM44Q96DX7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM44Q96DX7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM44Q96DX7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
TRIM44Q96DX7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
TRIM44Q96DX7 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM44Q96DX7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM44Q96DX7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.68■□□□□ 0.9
TRIM44Q96DX7 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TRIM44Q96DX7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM44Q96DX7 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM44Q96DX7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM44Q96DX7 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM44Q96DX7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
TRIM44Q96DX7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.68■□□□□ 0.9
TRIM44Q96DX7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM44Q96DX7 AL591742.1-201ENST00000604433 565 ntBASIC20.68■□□□□ 0.9
TRIM44Q96DX7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.68■□□□□ 0.9
TRIM44Q96DX7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.68■□□□□ 0.9
TRIM44Q96DX7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC20.68■□□□□ 0.9
TRIM44Q96DX7 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM44Q96DX7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM44Q96DX7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.68■□□□□ 0.9
TRIM44Q96DX7 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM44Q96DX7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM44Q96DX7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM44Q96DX7 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM44Q96DX7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM44Q96DX7 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TRIM44Q96DX7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM44Q96DX7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM44Q96DX7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
TRIM44Q96DX7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM44Q96DX7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM44Q96DX7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM44Q96DX7 MCRIP2P1-201ENST00000394346 511 ntBASIC20.67■□□□□ 0.9
TRIM44Q96DX7 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.67■□□□□ 0.9
TRIM44Q96DX7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TRIM44Q96DX7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM44Q96DX7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM44Q96DX7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM44Q96DX7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM44Q96DX7 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM44Q96DX7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TRIM44Q96DX7 AC112777.1-201ENST00000540175 1423 ntBASIC20.67■□□□□ 0.9
TRIM44Q96DX7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM44Q96DX7 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM44Q96DX7 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM44Q96DX7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM44Q96DX7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.67■□□□□ 0.9
TRIM44Q96DX7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM44Q96DX7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM44Q96DX7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.67■□□□□ 0.9
TRIM44Q96DX7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TRIM44Q96DX7 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
TRIM44Q96DX7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TRIM44Q96DX7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TRIM44Q96DX7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM44Q96DX7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TRIM44Q96DX7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.66■□□□□ 0.9
TRIM44Q96DX7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM44Q96DX7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM44Q96DX7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM44Q96DX7 FLJ38576-201ENST00000623820 2459 ntBASIC20.66■□□□□ 0.9
TRIM44Q96DX7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM44Q96DX7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM44Q96DX7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM44Q96DX7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM44Q96DX7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.66■□□□□ 0.9
TRIM44Q96DX7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM44Q96DX7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.66■□□□□ 0.9
TRIM44Q96DX7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM44Q96DX7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM44Q96DX7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TRIM44Q96DX7 LINC02199-201ENST00000506655 2702 ntBASIC20.66■□□□□ 0.9
TRIM44Q96DX7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM44Q96DX7 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM44Q96DX7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM44Q96DX7 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM44Q96DX7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC20.65■□□□□ 0.9
TRIM44Q96DX7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRIM44Q96DX7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM44Q96DX7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM44Q96DX7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM44Q96DX7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.65■□□□□ 0.9
TRIM44Q96DX7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM44Q96DX7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.65■□□□□ 0.9
TRIM44Q96DX7 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC20.65■□□□□ 0.9
TRIM44Q96DX7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM44Q96DX7 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM44Q96DX7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM44Q96DX7 KRT8P8-201ENST00000434750 1448 ntBASIC20.65■□□□□ 0.9
TRIM44Q96DX7 UNC93B3-201ENST00000308076 687 ntBASIC20.65■□□□□ 0.9
TRIM44Q96DX7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRIM44Q96DX7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM44Q96DX7 AC024257.2-201ENST00000549699 147 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms