Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN23Q96B33 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
CLDN23Q96B33 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN23Q96B33 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN23Q96B33 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN23Q96B33 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.15■□□□□ 0.5
CLDN23Q96B33 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CLDN23Q96B33 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CLDN23Q96B33 AC073621.1-201ENST00000392730 636 ntBASIC18.15■□□□□ 0.5
CLDN23Q96B33 METTL21AP1-201ENST00000438852 635 ntBASIC18.15■□□□□ 0.5
CLDN23Q96B33 PRYP5-201ENST00000451909 266 ntBASIC18.15■□□□□ 0.5
CLDN23Q96B33 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CLDN23Q96B33 CYMP-203ENST00000474680 1263 ntBASIC18.15■□□□□ 0.5
CLDN23Q96B33 RFPL4AP1-201ENST00000530883 850 ntBASIC18.15■□□□□ 0.5
CLDN23Q96B33 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.15■□□□□ 0.5
CLDN23Q96B33 AC006557.2-201ENST00000592985 1240 ntBASIC18.15■□□□□ 0.5
CLDN23Q96B33 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.15■□□□□ 0.5
CLDN23Q96B33 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN23Q96B33 AC073592.4-201ENST00000623827 446 ntBASIC18.15■□□□□ 0.5
CLDN23Q96B33 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN23Q96B33 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN23Q96B33 AC097374.2-201ENST00000618617 1306 ntBASIC18.15■□□□□ 0.5
CLDN23Q96B33 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN23Q96B33 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN23Q96B33 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN23Q96B33 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
CLDN23Q96B33 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN23Q96B33 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.14■□□□□ 0.49
CLDN23Q96B33 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN23Q96B33 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN23Q96B33 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.14■□□□□ 0.49
CLDN23Q96B33 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN23Q96B33 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.14■□□□□ 0.49
CLDN23Q96B33 KRT18P2-201ENST00000447938 1258 ntBASIC18.14■□□□□ 0.49
CLDN23Q96B33 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN23Q96B33 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.14■□□□□ 0.49
CLDN23Q96B33 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
CLDN23Q96B33 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN23Q96B33 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN23Q96B33 AL596442.2-201ENST00000610240 980 ntBASIC18.14■□□□□ 0.49
CLDN23Q96B33 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.14■□□□□ 0.49
CLDN23Q96B33 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN23Q96B33 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.14■□□□□ 0.49
CLDN23Q96B33 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CLDN23Q96B33 AL157384.1-201ENST00000445995 2473 ntBASIC18.14■□□□□ 0.49
CLDN23Q96B33 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN23Q96B33 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN23Q96B33 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
CLDN23Q96B33 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN23Q96B33 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN23Q96B33 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CLDN23Q96B33 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CLDN23Q96B33 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDN23Q96B33 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN23Q96B33 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN23Q96B33 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CLDN23Q96B33 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.13■□□□□ 0.49
CLDN23Q96B33 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN23Q96B33 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.13■□□□□ 0.49
CLDN23Q96B33 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CLDN23Q96B33 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN23Q96B33 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.13■□□□□ 0.49
CLDN23Q96B33 BX005266.1-201ENST00000473402 457 ntBASIC18.13■□□□□ 0.49
CLDN23Q96B33 AC108751.1-201ENST00000490852 363 ntBASIC18.13■□□□□ 0.49
CLDN23Q96B33 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.13■□□□□ 0.49
CLDN23Q96B33 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN23Q96B33 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN23Q96B33 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN23Q96B33 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN23Q96B33 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN23Q96B33 PMPCAP1-201ENST00000508114 1576 ntBASIC18.13■□□□□ 0.49
CLDN23Q96B33 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN23Q96B33 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CLDN23Q96B33 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN23Q96B33 LINC01126-201ENST00000623515 1646 ntBASIC18.12■□□□□ 0.49
CLDN23Q96B33 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN23Q96B33 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN23Q96B33 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN23Q96B33 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN23Q96B33 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN23Q96B33 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN23Q96B33 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN23Q96B33 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.12■□□□□ 0.49
CLDN23Q96B33 AC254562.1-201ENST00000417586 456 ntBASIC18.12■□□□□ 0.49
CLDN23Q96B33 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.12■□□□□ 0.49
CLDN23Q96B33 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN23Q96B33 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
CLDN23Q96B33 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.12■□□□□ 0.49
CLDN23Q96B33 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.12■□□□□ 0.49
CLDN23Q96B33 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDN23Q96B33 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN23Q96B33 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN23Q96B33 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDN23Q96B33 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN23Q96B33 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDN23Q96B33 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN23Q96B33 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.12■□□□□ 0.49
CLDN23Q96B33 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN23Q96B33 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.12■□□□□ 0.49
CLDN23Q96B33 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms