Protein–RNA interactions for Protein: Q92629

SGCD, Delta-sarcoglycan, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCDQ92629 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SGCDQ92629 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SGCDQ92629 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SGCDQ92629 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SGCDQ92629 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SGCDQ92629 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.7■□□□□ 0.26
SGCDQ92629 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.7■□□□□ 0.26
SGCDQ92629 MYLKP1-201ENST00000509077 1580 ntBASIC16.7■□□□□ 0.26
SGCDQ92629 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SGCDQ92629 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SGCDQ92629 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.7■□□□□ 0.26
SGCDQ92629 AC007322.1-201ENST00000426983 750 ntBASIC16.7■□□□□ 0.26
SGCDQ92629 AC006015.1-201ENST00000429970 570 ntBASIC16.7■□□□□ 0.26
SGCDQ92629 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.7■□□□□ 0.26
SGCDQ92629 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.7■□□□□ 0.26
SGCDQ92629 AL160286.2-201ENST00000567150 934 ntBASIC16.7■□□□□ 0.26
SGCDQ92629 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.7■□□□□ 0.26
SGCDQ92629 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SGCDQ92629 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SGCDQ92629 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.7■□□□□ 0.26
SGCDQ92629 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.7■□□□□ 0.26
SGCDQ92629 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
SGCDQ92629 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
SGCDQ92629 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.7■□□□□ 0.26
SGCDQ92629 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.7■□□□□ 0.26
SGCDQ92629 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SGCDQ92629 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SGCDQ92629 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SGCDQ92629 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SGCDQ92629 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SGCDQ92629 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SGCDQ92629 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SGCDQ92629 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SGCDQ92629 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SGCDQ92629 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SGCDQ92629 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SGCDQ92629 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SGCDQ92629 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SGCDQ92629 CDCA4P2-201ENST00000441182 718 ntBASIC16.69■□□□□ 0.26
SGCDQ92629 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.69■□□□□ 0.26
SGCDQ92629 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.69■□□□□ 0.26
SGCDQ92629 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SGCDQ92629 HLA-A-209ENST00000638375 975 ntBASIC16.69■□□□□ 0.26
SGCDQ92629 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SGCDQ92629 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SGCDQ92629 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.69■□□□□ 0.26
SGCDQ92629 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
SGCDQ92629 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SGCDQ92629 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SGCDQ92629 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SGCDQ92629 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SGCDQ92629 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SGCDQ92629 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.69■□□□□ 0.26
SGCDQ92629 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SGCDQ92629 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SGCDQ92629 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SGCDQ92629 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SGCDQ92629 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SGCDQ92629 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SGCDQ92629 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SGCDQ92629 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SGCDQ92629 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SGCDQ92629 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SGCDQ92629 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.68■□□□□ 0.26
SGCDQ92629 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SGCDQ92629 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SGCDQ92629 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SGCDQ92629 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.68■□□□□ 0.26
SGCDQ92629 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.68■□□□□ 0.26
SGCDQ92629 AL109923.1-201ENST00000618799 583 ntBASIC16.68■□□□□ 0.26
SGCDQ92629 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.68■□□□□ 0.26
SGCDQ92629 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SGCDQ92629 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SGCDQ92629 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SGCDQ92629 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.68■□□□□ 0.26
SGCDQ92629 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.68■□□□□ 0.26
SGCDQ92629 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
SGCDQ92629 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SGCDQ92629 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.68■□□□□ 0.26
SGCDQ92629 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SGCDQ92629 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
SGCDQ92629 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SGCDQ92629 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SGCDQ92629 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.67■□□□□ 0.26
SGCDQ92629 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SGCDQ92629 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.67■□□□□ 0.26
SGCDQ92629 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SGCDQ92629 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.67■□□□□ 0.26
SGCDQ92629 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.67■□□□□ 0.26
SGCDQ92629 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SGCDQ92629 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SGCDQ92629 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
SGCDQ92629 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SGCDQ92629 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
SGCDQ92629 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.67■□□□□ 0.26
SGCDQ92629 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SGCDQ92629 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
SGCDQ92629 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
SGCDQ92629 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.67■□□□□ 0.26
SGCDQ92629 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms