Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SLC44A1Q8WWI5 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SLC44A1Q8WWI5 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC44A1Q8WWI5 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
SLC44A1Q8WWI5 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
SLC44A1Q8WWI5 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SLC44A1Q8WWI5 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC44A1Q8WWI5 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SLC44A1Q8WWI5 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC44A1Q8WWI5 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC44A1Q8WWI5 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC44A1Q8WWI5 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SLC44A1Q8WWI5 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 AC141586.5-201ENST00000624546 2050 ntBASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 AC009053.2-201ENST00000563701 2365 ntBASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 AC097488.1-201ENST00000507834 756 ntBASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 NUDT16P1-203ENST00000513809 620 ntBASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC44A1Q8WWI5 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 AL359736.2-201ENST00000621992 437 ntBASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 KRT8P7-201ENST00000533003 1432 ntBASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 AL135905.2-201ENST00000584934 1404 ntBASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 AC012313.1-201ENST00000593393 3059 ntBASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC44A1Q8WWI5 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC44A1Q8WWI5 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC44A1Q8WWI5 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC44A1Q8WWI5 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC44A1Q8WWI5 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.27■□□□□ 0.52
SLC44A1Q8WWI5 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SLC44A1Q8WWI5 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC44A1Q8WWI5 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC44A1Q8WWI5 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.27■□□□□ 0.52
SLC44A1Q8WWI5 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC44A1Q8WWI5 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.27■□□□□ 0.52
SLC44A1Q8WWI5 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC44A1Q8WWI5 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC44A1Q8WWI5 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
SLC44A1Q8WWI5 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SLC44A1Q8WWI5 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC44A1Q8WWI5 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms