Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 AC138761.1-201ENST00000584393 385 ntBASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 AC010507.1-201ENST00000633895 436 ntBASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 GPR89P-201ENST00000407924 1495 ntBASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 FP475955.4-201ENST00000623131 1990 ntBASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ALMS1Q8TCU4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC12.22□□□□□ -0.45
ALMS1Q8TCU4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.22□□□□□ -0.45
ALMS1Q8TCU4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC12.22□□□□□ -0.45
ALMS1Q8TCU4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ALMS1Q8TCU4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
ALMS1Q8TCU4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
ALMS1Q8TCU4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC12.22□□□□□ -0.45
ALMS1Q8TCU4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
ALMS1Q8TCU4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC12.22□□□□□ -0.45
ALMS1Q8TCU4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ALMS1Q8TCU4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
ALMS1Q8TCU4 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC12.22□□□□□ -0.45
ALMS1Q8TCU4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC12.22□□□□□ -0.45
ALMS1Q8TCU4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.22□□□□□ -0.45
ALMS1Q8TCU4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ALMS1Q8TCU4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC12.22□□□□□ -0.45
ALMS1Q8TCU4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ALMS1Q8TCU4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ALMS1Q8TCU4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ALMS1Q8TCU4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.22□□□□□ -0.45
ALMS1Q8TCU4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
ALMS1Q8TCU4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ALMS1Q8TCU4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC12.22□□□□□ -0.45
ALMS1Q8TCU4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ALMS1Q8TCU4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ALMS1Q8TCU4 PMS2P4-201ENST00000412466 1052 ntBASIC12.22□□□□□ -0.45
ALMS1Q8TCU4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.22□□□□□ -0.45
ALMS1Q8TCU4 KRT18P65-201ENST00000439811 1286 ntBASIC12.22□□□□□ -0.45
ALMS1Q8TCU4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.22□□□□□ -0.45
ALMS1Q8TCU4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ALMS1Q8TCU4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ALMS1Q8TCU4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ALMS1Q8TCU4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ALMS1Q8TCU4 MTCL1P1-201ENST00000446207 792 ntBASIC12.21□□□□□ -0.45
ALMS1Q8TCU4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ALMS1Q8TCU4 AC093214.1-201ENST00000511688 1107 ntBASIC12.21□□□□□ -0.45
ALMS1Q8TCU4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ALMS1Q8TCU4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ALMS1Q8TCU4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ALMS1Q8TCU4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.21□□□□□ -0.45
ALMS1Q8TCU4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
ALMS1Q8TCU4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ALMS1Q8TCU4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ALMS1Q8TCU4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC12.21□□□□□ -0.45
ALMS1Q8TCU4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC12.21□□□□□ -0.45
ALMS1Q8TCU4 AC005225.4-201ENST00000557330 545 ntBASIC12.21□□□□□ -0.45
ALMS1Q8TCU4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.21□□□□□ -0.45
ALMS1Q8TCU4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.21□□□□□ -0.45
ALMS1Q8TCU4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC12.21□□□□□ -0.45
ALMS1Q8TCU4 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC12.21□□□□□ -0.45
ALMS1Q8TCU4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ALMS1Q8TCU4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC12.21□□□□□ -0.46
ALMS1Q8TCU4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
ALMS1Q8TCU4 KRT8P47-201ENST00000604727 1398 ntBASIC12.21□□□□□ -0.46
ALMS1Q8TCU4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ALMS1Q8TCU4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC12.21□□□□□ -0.46
ALMS1Q8TCU4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
ALMS1Q8TCU4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
ALMS1Q8TCU4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC12.21□□□□□ -0.46
ALMS1Q8TCU4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC12.21□□□□□ -0.46
ALMS1Q8TCU4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC12.21□□□□□ -0.46
ALMS1Q8TCU4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.21□□□□□ -0.46
ALMS1Q8TCU4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC12.21□□□□□ -0.46
ALMS1Q8TCU4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.21□□□□□ -0.46
ALMS1Q8TCU4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC12.21□□□□□ -0.46
ALMS1Q8TCU4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC12.21□□□□□ -0.46
ALMS1Q8TCU4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
ALMS1Q8TCU4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC12.21□□□□□ -0.46
ALMS1Q8TCU4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.46
ALMS1Q8TCU4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ALMS1Q8TCU4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms