Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
BEST2Q8NFU1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
BEST2Q8NFU1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
BEST2Q8NFU1 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BEST2Q8NFU1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.58■□□□□ 0.73
BEST2Q8NFU1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
BEST2Q8NFU1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BEST2Q8NFU1 ESPNP-201ENST00000270691 2015 ntBASIC19.58■□□□□ 0.73
BEST2Q8NFU1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
BEST2Q8NFU1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BEST2Q8NFU1 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BEST2Q8NFU1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BEST2Q8NFU1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
BEST2Q8NFU1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
BEST2Q8NFU1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BEST2Q8NFU1 TSPY12P-201ENST00000421279 868 ntBASIC19.58■□□□□ 0.72
BEST2Q8NFU1 AL450487.1-201ENST00000426799 995 ntBASIC19.58■□□□□ 0.72
BEST2Q8NFU1 DRAXINP1-201ENST00000437611 948 ntBASIC19.58■□□□□ 0.72
BEST2Q8NFU1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
BEST2Q8NFU1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.58■□□□□ 0.72
BEST2Q8NFU1 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.58■□□□□ 0.72
BEST2Q8NFU1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.58■□□□□ 0.72
BEST2Q8NFU1 AL592071.1-201ENST00000611956 408 ntBASIC19.58■□□□□ 0.72
BEST2Q8NFU1 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
BEST2Q8NFU1 AC124864.1-201ENST00000623408 392 ntBASIC19.58■□□□□ 0.72
BEST2Q8NFU1 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.58■□□□□ 0.72
BEST2Q8NFU1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.58■□□□□ 0.72
BEST2Q8NFU1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BEST2Q8NFU1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BEST2Q8NFU1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
BEST2Q8NFU1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
BEST2Q8NFU1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BEST2Q8NFU1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
BEST2Q8NFU1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BEST2Q8NFU1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BEST2Q8NFU1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.58■□□□□ 0.72
BEST2Q8NFU1 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
BEST2Q8NFU1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.58■□□□□ 0.72
BEST2Q8NFU1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.57■□□□□ 0.72
BEST2Q8NFU1 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BEST2Q8NFU1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BEST2Q8NFU1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
BEST2Q8NFU1 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BEST2Q8NFU1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
BEST2Q8NFU1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.57■□□□□ 0.72
BEST2Q8NFU1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
BEST2Q8NFU1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.57■□□□□ 0.72
BEST2Q8NFU1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BEST2Q8NFU1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.57■□□□□ 0.72
BEST2Q8NFU1 RN7SL606P-201ENST00000472779 293 ntBASIC19.57■□□□□ 0.72
BEST2Q8NFU1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
BEST2Q8NFU1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BEST2Q8NFU1 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.57■□□□□ 0.72
BEST2Q8NFU1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
BEST2Q8NFU1 TPSP2-201ENST00000561760 610 ntBASIC19.57■□□□□ 0.72
BEST2Q8NFU1 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
BEST2Q8NFU1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.57■□□□□ 0.72
BEST2Q8NFU1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.57■□□□□ 0.72
BEST2Q8NFU1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
BEST2Q8NFU1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
BEST2Q8NFU1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
BEST2Q8NFU1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BEST2Q8NFU1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BEST2Q8NFU1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.57■□□□□ 0.72
BEST2Q8NFU1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
BEST2Q8NFU1 AC004408.2-201ENST00000623613 2777 ntBASIC19.56■□□□□ 0.72
BEST2Q8NFU1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BEST2Q8NFU1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
BEST2Q8NFU1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
BEST2Q8NFU1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.56■□□□□ 0.72
BEST2Q8NFU1 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
BEST2Q8NFU1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
BEST2Q8NFU1 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BEST2Q8NFU1 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.56■□□□□ 0.72
BEST2Q8NFU1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
BEST2Q8NFU1 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.56■□□□□ 0.72
BEST2Q8NFU1 LINC00265-3P-201ENST00000447588 903 ntBASIC19.56■□□□□ 0.72
BEST2Q8NFU1 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.56■□□□□ 0.72
BEST2Q8NFU1 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.56■□□□□ 0.72
BEST2Q8NFU1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.56■□□□□ 0.72
BEST2Q8NFU1 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
BEST2Q8NFU1 LINC00602-201ENST00000629776 2065 ntBASIC19.56■□□□□ 0.72
BEST2Q8NFU1 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BEST2Q8NFU1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.56■□□□□ 0.72
BEST2Q8NFU1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.56■□□□□ 0.72
BEST2Q8NFU1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
BEST2Q8NFU1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BEST2Q8NFU1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
BEST2Q8NFU1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.55■□□□□ 0.72
BEST2Q8NFU1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms