Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM35BQ8NCS4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.35■□□□□ 0.69
TMEM35BQ8NCS4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM35BQ8NCS4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM35BQ8NCS4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TMEM35BQ8NCS4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM35BQ8NCS4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM35BQ8NCS4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
TMEM35BQ8NCS4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM35BQ8NCS4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM35BQ8NCS4 YBX1P2-201ENST00000489612 999 ntBASIC19.34■□□□□ 0.69
TMEM35BQ8NCS4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.34■□□□□ 0.69
TMEM35BQ8NCS4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.34■□□□□ 0.69
TMEM35BQ8NCS4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
TMEM35BQ8NCS4 AC139887.4-201ENST00000607877 719 ntBASIC19.34■□□□□ 0.69
TMEM35BQ8NCS4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM35BQ8NCS4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM35BQ8NCS4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM35BQ8NCS4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM35BQ8NCS4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM35BQ8NCS4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.34■□□□□ 0.69
TMEM35BQ8NCS4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
TMEM35BQ8NCS4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TMEM35BQ8NCS4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
TMEM35BQ8NCS4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TMEM35BQ8NCS4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM35BQ8NCS4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM35BQ8NCS4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.33■□□□□ 0.69
TMEM35BQ8NCS4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
TMEM35BQ8NCS4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.33■□□□□ 0.69
TMEM35BQ8NCS4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM35BQ8NCS4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM35BQ8NCS4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM35BQ8NCS4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.33■□□□□ 0.69
TMEM35BQ8NCS4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM35BQ8NCS4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM35BQ8NCS4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM35BQ8NCS4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM35BQ8NCS4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.33■□□□□ 0.68
TMEM35BQ8NCS4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM35BQ8NCS4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM35BQ8NCS4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.33■□□□□ 0.68
TMEM35BQ8NCS4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM35BQ8NCS4 KRT18P57-201ENST00000443599 1254 ntBASIC19.33■□□□□ 0.68
TMEM35BQ8NCS4 RASA4DP-201ENST00000460726 1199 ntBASIC19.33■□□□□ 0.68
TMEM35BQ8NCS4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.33■□□□□ 0.68
TMEM35BQ8NCS4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.33■□□□□ 0.68
TMEM35BQ8NCS4 AC008687.5-201ENST00000593746 558 ntBASIC19.33■□□□□ 0.68
TMEM35BQ8NCS4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.33■□□□□ 0.68
TMEM35BQ8NCS4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.33■□□□□ 0.68
TMEM35BQ8NCS4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM35BQ8NCS4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TMEM35BQ8NCS4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM35BQ8NCS4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM35BQ8NCS4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.33■□□□□ 0.68
TMEM35BQ8NCS4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.33■□□□□ 0.68
TMEM35BQ8NCS4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM35BQ8NCS4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM35BQ8NCS4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM35BQ8NCS4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
TMEM35BQ8NCS4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM35BQ8NCS4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TMEM35BQ8NCS4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
TMEM35BQ8NCS4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM35BQ8NCS4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM35BQ8NCS4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM35BQ8NCS4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TMEM35BQ8NCS4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM35BQ8NCS4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM35BQ8NCS4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM35BQ8NCS4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM35BQ8NCS4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TMEM35BQ8NCS4 AC117947.1-201ENST00000427448 529 ntBASIC19.32■□□□□ 0.68
TMEM35BQ8NCS4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM35BQ8NCS4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM35BQ8NCS4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TMEM35BQ8NCS4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TMEM35BQ8NCS4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM35BQ8NCS4 AC138028.4-201ENST00000564984 1845 ntBASIC19.32■□□□□ 0.68
TMEM35BQ8NCS4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TMEM35BQ8NCS4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM35BQ8NCS4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TMEM35BQ8NCS4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.32■□□□□ 0.68
TMEM35BQ8NCS4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM35BQ8NCS4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.32■□□□□ 0.68
TMEM35BQ8NCS4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM35BQ8NCS4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
TMEM35BQ8NCS4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM35BQ8NCS4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM35BQ8NCS4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM35BQ8NCS4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM35BQ8NCS4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM35BQ8NCS4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM35BQ8NCS4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.31■□□□□ 0.68
TMEM35BQ8NCS4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM35BQ8NCS4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM35BQ8NCS4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM35BQ8NCS4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TMEM35BQ8NCS4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.31■□□□□ 0.68
TMEM35BQ8NCS4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms