Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 AC007613.1-201ENST00000572811 2597 ntBASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 FDX1P1-201ENST00000449115 551 ntBASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 LINC01711-201ENST00000598340 967 ntBASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC155Q8N6L0 AC090340.1-201ENST00000620778 4980 ntBASIC20.65■□□□□ 0.9
CCDC155Q8N6L0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC155Q8N6L0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC155Q8N6L0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC155Q8N6L0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC155Q8N6L0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC155Q8N6L0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CCDC155Q8N6L0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC155Q8N6L0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC155Q8N6L0 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC155Q8N6L0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC155Q8N6L0 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC155Q8N6L0 KRT8P10-201ENST00000450021 1447 ntBASIC20.65■□□□□ 0.9
CCDC155Q8N6L0 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CCDC155Q8N6L0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC155Q8N6L0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC155Q8N6L0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC155Q8N6L0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC155Q8N6L0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC155Q8N6L0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC155Q8N6L0 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC155Q8N6L0 AL121772.3-201ENST00000610840 674 ntBASIC20.65■□□□□ 0.9
CCDC155Q8N6L0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CCDC155Q8N6L0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC155Q8N6L0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CCDC155Q8N6L0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC155Q8N6L0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC155Q8N6L0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC155Q8N6L0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CCDC155Q8N6L0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC155Q8N6L0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC155Q8N6L0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CCDC155Q8N6L0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CCDC155Q8N6L0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC155Q8N6L0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC155Q8N6L0 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC155Q8N6L0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC155Q8N6L0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC155Q8N6L0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC155Q8N6L0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC155Q8N6L0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CCDC155Q8N6L0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.64■□□□□ 0.89
CCDC155Q8N6L0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC155Q8N6L0 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC155Q8N6L0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.64■□□□□ 0.89
CCDC155Q8N6L0 IFNL4P1-201ENST00000607083 540 ntBASIC20.64■□□□□ 0.89
CCDC155Q8N6L0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CCDC155Q8N6L0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC155Q8N6L0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC155Q8N6L0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC155Q8N6L0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC155Q8N6L0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC155Q8N6L0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC155Q8N6L0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC155Q8N6L0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC155Q8N6L0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC155Q8N6L0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC155Q8N6L0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CCDC155Q8N6L0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC155Q8N6L0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC155Q8N6L0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC155Q8N6L0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC155Q8N6L0 DRAXINP1-201ENST00000437611 948 ntBASIC20.63■□□□□ 0.89
CCDC155Q8N6L0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC155Q8N6L0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC155Q8N6L0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC155Q8N6L0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC155Q8N6L0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC155Q8N6L0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC155Q8N6L0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CCDC155Q8N6L0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC155Q8N6L0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms