Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 OR6D1P-202ENST00000641007 5290 ntBASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 AC063952.2-201ENST00000498792 1227 ntBASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C11orf42Q8N5U0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 AP000593.1-201ENST00000393668 712 ntBASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 MYLKP1-201ENST00000509077 1580 ntBASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
C11orf42Q8N5U0 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms