Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
ATPAF2Q8N5M1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATPAF2Q8N5M1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATPAF2Q8N5M1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.72■□□□□ 0.59
ATPAF2Q8N5M1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATPAF2Q8N5M1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATPAF2Q8N5M1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATPAF2Q8N5M1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATPAF2Q8N5M1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATPAF2Q8N5M1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ATPAF2Q8N5M1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATPAF2Q8N5M1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ATPAF2Q8N5M1 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.72■□□□□ 0.59
ATPAF2Q8N5M1 HOMER2P1-201ENST00000455653 964 ntBASIC18.72■□□□□ 0.59
ATPAF2Q8N5M1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATPAF2Q8N5M1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.72■□□□□ 0.59
ATPAF2Q8N5M1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATPAF2Q8N5M1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.72■□□□□ 0.59
ATPAF2Q8N5M1 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATPAF2Q8N5M1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATPAF2Q8N5M1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ATPAF2Q8N5M1 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATPAF2Q8N5M1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATPAF2Q8N5M1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATPAF2Q8N5M1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
ATPAF2Q8N5M1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATPAF2Q8N5M1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATPAF2Q8N5M1 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATPAF2Q8N5M1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATPAF2Q8N5M1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATPAF2Q8N5M1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.71■□□□□ 0.59
ATPAF2Q8N5M1 AL390961.4-201ENST00000623958 2535 ntBASIC18.71■□□□□ 0.59
ATPAF2Q8N5M1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATPAF2Q8N5M1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
ATPAF2Q8N5M1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATPAF2Q8N5M1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ATPAF2Q8N5M1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATPAF2Q8N5M1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.71■□□□□ 0.59
ATPAF2Q8N5M1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATPAF2Q8N5M1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATPAF2Q8N5M1 AC104076.2-201ENST00000448912 469 ntBASIC18.71■□□□□ 0.59
ATPAF2Q8N5M1 AL359075.1-203ENST00000462729 1002 ntBASIC18.71■□□□□ 0.59
ATPAF2Q8N5M1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.71■□□□□ 0.59
ATPAF2Q8N5M1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.71■□□□□ 0.59
ATPAF2Q8N5M1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.71■□□□□ 0.59
ATPAF2Q8N5M1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATPAF2Q8N5M1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATPAF2Q8N5M1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATPAF2Q8N5M1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATPAF2Q8N5M1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ATPAF2Q8N5M1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATPAF2Q8N5M1 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATPAF2Q8N5M1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
ATPAF2Q8N5M1 LINC01126-201ENST00000623515 1646 ntBASIC18.71■□□□□ 0.58
ATPAF2Q8N5M1 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATPAF2Q8N5M1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATPAF2Q8N5M1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ATPAF2Q8N5M1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATPAF2Q8N5M1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.7■□□□□ 0.58
ATPAF2Q8N5M1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.7■□□□□ 0.58
ATPAF2Q8N5M1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ATPAF2Q8N5M1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATPAF2Q8N5M1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.7■□□□□ 0.58
ATPAF2Q8N5M1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
ATPAF2Q8N5M1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATPAF2Q8N5M1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
ATPAF2Q8N5M1 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATPAF2Q8N5M1 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATPAF2Q8N5M1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATPAF2Q8N5M1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATPAF2Q8N5M1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATPAF2Q8N5M1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.7■□□□□ 0.58
ATPAF2Q8N5M1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.7■□□□□ 0.58
ATPAF2Q8N5M1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATPAF2Q8N5M1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.7■□□□□ 0.58
ATPAF2Q8N5M1 AL136038.4-201ENST00000603606 1261 ntBASIC18.7■□□□□ 0.58
ATPAF2Q8N5M1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATPAF2Q8N5M1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ATPAF2Q8N5M1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATPAF2Q8N5M1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATPAF2Q8N5M1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ATPAF2Q8N5M1 PHGDH-209ENST00000641074 1780 ntBASIC18.7■□□□□ 0.58
ATPAF2Q8N5M1 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.7■□□□□ 0.58
ATPAF2Q8N5M1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATPAF2Q8N5M1 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATPAF2Q8N5M1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
ATPAF2Q8N5M1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.69■□□□□ 0.58
ATPAF2Q8N5M1 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.69■□□□□ 0.58
ATPAF2Q8N5M1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATPAF2Q8N5M1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATPAF2Q8N5M1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATPAF2Q8N5M1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATPAF2Q8N5M1 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATPAF2Q8N5M1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.69■□□□□ 0.58
ATPAF2Q8N5M1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATPAF2Q8N5M1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.69■□□□□ 0.58
ATPAF2Q8N5M1 AC008687.5-201ENST00000593746 558 ntBASIC18.69■□□□□ 0.58
ATPAF2Q8N5M1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
ATPAF2Q8N5M1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATPAF2Q8N5M1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms