Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCML4Q8N228 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SCML4Q8N228 AC246785.2-201ENST00000432512 513 ntBASIC18.93■□□□□ 0.62
SCML4Q8N228 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCML4Q8N228 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SCML4Q8N228 IGHV3-41-201ENST00000613121 348 ntBASIC18.93■□□□□ 0.62
SCML4Q8N228 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.93■□□□□ 0.62
SCML4Q8N228 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SCML4Q8N228 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SCML4Q8N228 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.93■□□□□ 0.62
SCML4Q8N228 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
SCML4Q8N228 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.93■□□□□ 0.62
SCML4Q8N228 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SCML4Q8N228 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SCML4Q8N228 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCML4Q8N228 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.92■□□□□ 0.62
SCML4Q8N228 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SCML4Q8N228 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
SCML4Q8N228 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SCML4Q8N228 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SCML4Q8N228 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.92■□□□□ 0.62
SCML4Q8N228 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SCML4Q8N228 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCML4Q8N228 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SCML4Q8N228 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCML4Q8N228 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SCML4Q8N228 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCML4Q8N228 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.92■□□□□ 0.62
SCML4Q8N228 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.92■□□□□ 0.62
SCML4Q8N228 TPSP2-201ENST00000561760 610 ntBASIC18.92■□□□□ 0.62
SCML4Q8N228 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.92■□□□□ 0.62
SCML4Q8N228 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SCML4Q8N228 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCML4Q8N228 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCML4Q8N228 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.92■□□□□ 0.62
SCML4Q8N228 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SCML4Q8N228 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCML4Q8N228 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCML4Q8N228 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCML4Q8N228 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCML4Q8N228 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCML4Q8N228 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCML4Q8N228 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
SCML4Q8N228 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
SCML4Q8N228 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.91■□□□□ 0.62
SCML4Q8N228 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.91■□□□□ 0.62
SCML4Q8N228 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCML4Q8N228 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCML4Q8N228 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
SCML4Q8N228 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.91■□□□□ 0.62
SCML4Q8N228 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.91■□□□□ 0.62
SCML4Q8N228 AP002414.4-201ENST00000589764 1148 ntBASIC18.91■□□□□ 0.62
SCML4Q8N228 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCML4Q8N228 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.91■□□□□ 0.62
SCML4Q8N228 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.91■□□□□ 0.62
SCML4Q8N228 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.91■□□□□ 0.62
SCML4Q8N228 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCML4Q8N228 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCML4Q8N228 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.91■□□□□ 0.62
SCML4Q8N228 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCML4Q8N228 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.91■□□□□ 0.62
SCML4Q8N228 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCML4Q8N228 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCML4Q8N228 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCML4Q8N228 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCML4Q8N228 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCML4Q8N228 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCML4Q8N228 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCML4Q8N228 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.91■□□□□ 0.62
SCML4Q8N228 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.9■□□□□ 0.62
SCML4Q8N228 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.9■□□□□ 0.62
SCML4Q8N228 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SCML4Q8N228 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.9■□□□□ 0.62
SCML4Q8N228 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCML4Q8N228 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCML4Q8N228 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCML4Q8N228 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCML4Q8N228 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCML4Q8N228 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SCML4Q8N228 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.9■□□□□ 0.62
SCML4Q8N228 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SCML4Q8N228 AC124864.1-201ENST00000623408 392 ntBASIC18.9■□□□□ 0.62
SCML4Q8N228 KRT18P1-202ENST00000452408 1331 ntBASIC18.9■□□□□ 0.62
SCML4Q8N228 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.9■□□□□ 0.62
SCML4Q8N228 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCML4Q8N228 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
SCML4Q8N228 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SCML4Q8N228 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SCML4Q8N228 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SCML4Q8N228 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.9■□□□□ 0.62
SCML4Q8N228 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SCML4Q8N228 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
SCML4Q8N228 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SCML4Q8N228 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
SCML4Q8N228 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.89■□□□□ 0.62
SCML4Q8N228 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.89■□□□□ 0.62
SCML4Q8N228 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SCML4Q8N228 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SCML4Q8N228 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SCML4Q8N228 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms