Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIX5Q8N196 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.65■□□□□ 0.58
SIX5Q8N196 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.65■□□□□ 0.58
SIX5Q8N196 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIX5Q8N196 AC134684.3-201ENST00000641758 218 ntBASIC18.65■□□□□ 0.58
SIX5Q8N196 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.65■□□□□ 0.58
SIX5Q8N196 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIX5Q8N196 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIX5Q8N196 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIX5Q8N196 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIX5Q8N196 FEM1AP3-201ENST00000403722 1741 ntBASIC18.65■□□□□ 0.58
SIX5Q8N196 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
SIX5Q8N196 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.64■□□□□ 0.58
SIX5Q8N196 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SIX5Q8N196 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.64■□□□□ 0.57
SIX5Q8N196 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIX5Q8N196 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIX5Q8N196 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
SIX5Q8N196 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.64■□□□□ 0.57
SIX5Q8N196 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIX5Q8N196 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIX5Q8N196 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SIX5Q8N196 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIX5Q8N196 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.64■□□□□ 0.57
SIX5Q8N196 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
SIX5Q8N196 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIX5Q8N196 RNA5SP415-201ENST00000517246 115 ntBASIC18.64■□□□□ 0.57
SIX5Q8N196 SART3-203ENST00000546611 1184 ntBASIC18.64■□□□□ 0.57
SIX5Q8N196 AC040169.1-201ENST00000565382 521 ntBASIC18.64■□□□□ 0.57
SIX5Q8N196 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SIX5Q8N196 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.64■□□□□ 0.57
SIX5Q8N196 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SIX5Q8N196 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SIX5Q8N196 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
SIX5Q8N196 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.64■□□□□ 0.57
SIX5Q8N196 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIX5Q8N196 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIX5Q8N196 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIX5Q8N196 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIX5Q8N196 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SIX5Q8N196 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
SIX5Q8N196 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIX5Q8N196 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIX5Q8N196 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.63■□□□□ 0.57
SIX5Q8N196 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SIX5Q8N196 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIX5Q8N196 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.63■□□□□ 0.57
SIX5Q8N196 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SIX5Q8N196 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SIX5Q8N196 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.63■□□□□ 0.57
SIX5Q8N196 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SIX5Q8N196 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.63■□□□□ 0.57
SIX5Q8N196 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIX5Q8N196 OR7E14P-202ENST00000530490 1290 ntBASIC18.63■□□□□ 0.57
SIX5Q8N196 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.63■□□□□ 0.57
SIX5Q8N196 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.63■□□□□ 0.57
SIX5Q8N196 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
SIX5Q8N196 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIX5Q8N196 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SIX5Q8N196 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.63■□□□□ 0.57
SIX5Q8N196 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
SIX5Q8N196 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.63■□□□□ 0.57
SIX5Q8N196 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SIX5Q8N196 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SIX5Q8N196 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIX5Q8N196 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIX5Q8N196 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SIX5Q8N196 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIX5Q8N196 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SIX5Q8N196 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SIX5Q8N196 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIX5Q8N196 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SIX5Q8N196 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.62■□□□□ 0.57
SIX5Q8N196 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.62■□□□□ 0.57
SIX5Q8N196 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.62■□□□□ 0.57
SIX5Q8N196 AC009533.2-201ENST00000543664 586 ntBASIC18.62■□□□□ 0.57
SIX5Q8N196 AC012640.2-201ENST00000561606 901 ntBASIC18.62■□□□□ 0.57
SIX5Q8N196 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.62■□□□□ 0.57
SIX5Q8N196 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.62■□□□□ 0.57
SIX5Q8N196 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SIX5Q8N196 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIX5Q8N196 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.62■□□□□ 0.57
SIX5Q8N196 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIX5Q8N196 KRT8P50-201ENST00000562022 1438 ntBASIC18.62■□□□□ 0.57
SIX5Q8N196 AP005117.1-201ENST00000584346 1413 ntBASIC18.62■□□□□ 0.57
SIX5Q8N196 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.62■□□□□ 0.57
SIX5Q8N196 Z98044.1-201ENST00000632503 1764 ntBASIC18.62■□□□□ 0.57
SIX5Q8N196 AL357033.4-201ENST00000617703 1807 ntBASIC18.62■□□□□ 0.57
SIX5Q8N196 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIX5Q8N196 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SIX5Q8N196 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SIX5Q8N196 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIX5Q8N196 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIX5Q8N196 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.62■□□□□ 0.57
SIX5Q8N196 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIX5Q8N196 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIX5Q8N196 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.61■□□□□ 0.57
SIX5Q8N196 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIX5Q8N196 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIX5Q8N196 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms