Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 KRT18P41-201ENST00000518924 1277 ntBASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 AC034236.2-201ENST00000606662 1610 ntBASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC50Q8IVM0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC50Q8IVM0 REXO1L9P-201ENST00000604264 2108 ntBASIC19.28■□□□□ 0.68
CCDC50Q8IVM0 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC50Q8IVM0 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC50Q8IVM0 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC50Q8IVM0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC50Q8IVM0 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC50Q8IVM0 AC067852.2-201ENST00000590513 2313 ntBASIC19.28■□□□□ 0.68
CCDC50Q8IVM0 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC50Q8IVM0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC50Q8IVM0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CCDC50Q8IVM0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCDC50Q8IVM0 AP000593.1-201ENST00000393668 712 ntBASIC19.28■□□□□ 0.68
CCDC50Q8IVM0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC50Q8IVM0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC50Q8IVM0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC50Q8IVM0 AC233702.5-201ENST00000584107 538 ntBASIC19.28■□□□□ 0.68
CCDC50Q8IVM0 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC50Q8IVM0 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC50Q8IVM0 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC50Q8IVM0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC50Q8IVM0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC50Q8IVM0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC50Q8IVM0 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC50Q8IVM0 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC50Q8IVM0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CCDC50Q8IVM0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CCDC50Q8IVM0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
CCDC50Q8IVM0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
CCDC50Q8IVM0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
CCDC50Q8IVM0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC50Q8IVM0 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC50Q8IVM0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC50Q8IVM0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC50Q8IVM0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC50Q8IVM0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC50Q8IVM0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC50Q8IVM0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC50Q8IVM0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC50Q8IVM0 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.27■□□□□ 0.68
CCDC50Q8IVM0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC50Q8IVM0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC50Q8IVM0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC50Q8IVM0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
CCDC50Q8IVM0 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC50Q8IVM0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC50Q8IVM0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC50Q8IVM0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
CCDC50Q8IVM0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
CCDC50Q8IVM0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC50Q8IVM0 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC50Q8IVM0 AC099398.1-201ENST00000567919 2776 ntBASIC19.27■□□□□ 0.67
CCDC50Q8IVM0 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC50Q8IVM0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC50Q8IVM0 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC50Q8IVM0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC50Q8IVM0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC50Q8IVM0 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC50Q8IVM0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC50Q8IVM0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC50Q8IVM0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC50Q8IVM0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC50Q8IVM0 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC50Q8IVM0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC50Q8IVM0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC50Q8IVM0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC50Q8IVM0 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC50Q8IVM0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC50Q8IVM0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC50Q8IVM0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC50Q8IVM0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC50Q8IVM0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms